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Currently, it's up to each GATK4 tool to declare it's own tool(self): -> str, it would be much better (way more consistent), if the Gatk4 tool base declared the ID as:
classGatk4ToolBase(BioinformaticsTool, ABC):
deftool(self) ->str:
return"Gatk4"+self.gatk_command()
# other tool definitions
Removing the other GATK def tool lines from the GATK tools is the time-consuming bit.
The text was updated successfully, but these errors were encountered:
Currently, it's up to each GATK4 tool to declare it's own
tool(self): -> str
, it would be much better (way more consistent), if the Gatk4 tool base declared the ID as:Removing the other GATK
def tool
lines from the GATK tools is the time-consuming bit.The text was updated successfully, but these errors were encountered: