From 29a223c835b2b7f0f605607719d40af41dd06540 Mon Sep 17 00:00:00 2001 From: Sara JC Gosline Date: Mon, 8 Jul 2024 16:42:47 -0700 Subject: [PATCH] updated --- build/docker/Dockerfile.broad_sanger_exp | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/build/docker/Dockerfile.broad_sanger_exp b/build/docker/Dockerfile.broad_sanger_exp index 1b1b1600..baf1fdf6 100755 --- a/build/docker/Dockerfile.broad_sanger_exp +++ b/build/docker/Dockerfile.broad_sanger_exp @@ -1,11 +1,14 @@ -FROM r-base:4.2.1 +FROM r-base:4.4.1 ENV DEBIAN_FRONTEND=noninteractive RUN apt-get update --fix-missing +#RUN apt-get install -y --fix-missing --allow-unauthenticated build-essential libpq-dev python3.10 python3-pip python3-setuptools python3-dev python3-venv libcurl4-openssl-dev libxml2-dev libglpk-dev + RUN apt-get install -y --fix-missing --allow-unauthenticated build-essential python3-pip python3-setuptools python3-dev python3-venv libcurl4-openssl-dev libglpk-dev libxml2-dev libpq-dev RUN python3 -m venv /opt/venv RUN /opt/venv/bin/pip3 install --upgrade pip + # Set MPLCONFIGDIR to a writable directory ENV MPLCONFIGDIR=/tmp/matplotlib RUN mkdir -p /tmp/matplotlib