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Assess the correlation between mRNA and protein separated out by immune subtype #61

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sgosline opened this issue Feb 2, 2021 · 3 comments
Open

Assess the correlation between mRNA and protein separated out by immune subtype #61

sgosline opened this issue Feb 2, 2021 · 3 comments
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sgosline commented Feb 2, 2021

Currently @pietrisko is analyzing the agreement between mRNA and protein separated out by immune subtype. What subtypes show high correlation in each subtype? W hich subtypes disagree?
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sgosline commented Feb 9, 2021

Are the immune subtypes going to be analyzed in time for publication?

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@sgosline added files to perfeval/figures

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sgosline commented Oct 15, 2021 •
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I still like this idea - we can group patients by subtype then compute the mrna/prot correlation. Assigning to @LifeWorks so that he can break down the current immune subtype calculation file to add in this step.

@sgosline sgosline assigned LifeWorks and unassigned pietrisko Oct 15, 2021
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@LifeWorks @sgosline @pietrisko