diff --git a/flow/connectors/bigquery/bigquery.go b/flow/connectors/bigquery/bigquery.go
index d6504322c..94155343e 100644
--- a/flow/connectors/bigquery/bigquery.go
+++ b/flow/connectors/bigquery/bigquery.go
@@ -253,6 +253,7 @@ func (c *BigQueryConnector) getDistinctTableNamesInBatch(
 	ctx context.Context,
 	flowJobName string,
 	batchId int64,
+	tableToSchema map[string]*protos.TableSchema,
 ) ([]string, error) {
 	rawTableName := c.getRawTableName(flowJobName)
 
@@ -283,7 +284,11 @@ func (c *BigQueryConnector) getDistinctTableNamesInBatch(
 		}
 		if len(row) > 0 {
 			value := row[0].(string)
-			distinctTableNames = append(distinctTableNames, value)
+			if _, ok := tableToSchema[value]; ok {
+				distinctTableNames = append(distinctTableNames, value)
+			} else {
+				c.logger.Warn("table not found in table to schema mapping", "table", value)
+			}
 		}
 	}
 
@@ -446,6 +451,7 @@ func (c *BigQueryConnector) mergeTablesInThisBatch(
 		ctx,
 		flowName,
 		batchId,
+		tableToSchema,
 	)
 	if err != nil {
 		return fmt.Errorf("couldn't get distinct table names to normalize: %w", err)
diff --git a/flow/connectors/clickhouse/normalize.go b/flow/connectors/clickhouse/normalize.go
index fabe07a35..f7f6d8f98 100644
--- a/flow/connectors/clickhouse/normalize.go
+++ b/flow/connectors/clickhouse/normalize.go
@@ -259,6 +259,7 @@ func (c *ClickHouseConnector) NormalizeRecords(
 		req.FlowJobName,
 		req.SyncBatchID,
 		normBatchID,
+		req.TableNameSchemaMapping,
 	)
 	if err != nil {
 		c.logger.Error("[clickhouse] error while getting distinct table names in batch", "error", err)
@@ -484,6 +485,7 @@ func (c *ClickHouseConnector) getDistinctTableNamesInBatch(
 	flowJobName string,
 	syncBatchID int64,
 	normalizeBatchID int64,
+	tableToSchema map[string]*protos.TableSchema,
 ) ([]string, error) {
 	rawTbl := c.getRawTableName(flowJobName)
 
@@ -507,7 +509,11 @@ func (c *ClickHouseConnector) getDistinctTableNamesInBatch(
 			return nil, errors.New("table name is not valid")
 		}
 
-		tableNames = append(tableNames, tableName.String)
+		if _, ok := tableToSchema[tableName.String]; ok {
+			tableNames = append(tableNames, tableName.String)
+		} else {
+			c.logger.Warn("table not found in table to schema mapping", "table", tableName.String)
+		}
 	}
 
 	if err := rows.Err(); err != nil {
diff --git a/flow/connectors/postgres/client.go b/flow/connectors/postgres/client.go
index 70b0d15d1..172a45c6b 100644
--- a/flow/connectors/postgres/client.go
+++ b/flow/connectors/postgres/client.go
@@ -5,6 +5,7 @@ import (
 	"errors"
 	"fmt"
 	"log/slog"
+	"slices"
 	"strings"
 
 	"github.com/jackc/pgerrcode"
@@ -594,6 +595,7 @@ func (c *PostgresConnector) getDistinctTableNamesInBatch(
 	flowJobName string,
 	syncBatchID int64,
 	normalizeBatchID int64,
+	tableToSchema map[string]*protos.TableSchema,
 ) ([]string, error) {
 	rawTableIdentifier := getRawTableIdentifier(flowJobName)
 
@@ -607,7 +609,13 @@ func (c *PostgresConnector) getDistinctTableNamesInBatch(
 	if err != nil {
 		return nil, fmt.Errorf("failed to scan row: %w", err)
 	}
-	return destinationTableNames, nil
+	return slices.DeleteFunc(destinationTableNames, func(name string) bool {
+		if _, ok := tableToSchema[name]; !ok {
+			c.logger.Warn("table not found in table to schema mapping", "table", name)
+			return true
+		}
+		return false
+	}), nil
 }
 
 func (c *PostgresConnector) getTableNametoUnchangedCols(
diff --git a/flow/connectors/postgres/postgres.go b/flow/connectors/postgres/postgres.go
index 435df65ed..02c61b2eb 100644
--- a/flow/connectors/postgres/postgres.go
+++ b/flow/connectors/postgres/postgres.go
@@ -643,7 +643,7 @@ func (c *PostgresConnector) NormalizeRecords(
 	}
 
 	destinationTableNames, err := c.getDistinctTableNamesInBatch(
-		ctx, req.FlowJobName, req.SyncBatchID, normBatchID)
+		ctx, req.FlowJobName, req.SyncBatchID, normBatchID, req.TableNameSchemaMapping)
 	if err != nil {
 		return nil, err
 	}