Author: Kerry Key, Ryan Abernathey Affiliation: Lamont-Doherty Earth Observatory
+
Author: Ryan Abernathey, Kerry Key Affiliation: Lamont-Doherty Earth Observatory
This book grew out of a course developed at Columbia University called Research Computing in Earth Science. It was written mostly by Ryan Abernathey, with significant contributions from Kerry Key. By separating the book from the class, we hope to create an open-source community resource for python education ... more
@@ -158,7 +158,7 @@ Packages
An Introduction to Earth and Environmental Data Science
-Author: Kerry Key, Ryan Abernathey
+Author: Ryan Abernathey, Kerry Key
Affiliation: Lamont-Doherty Earth Observatory
This book grew out of a course developed at Columbia University called Research Computing in Earth Science. It was written mostly by Ryan Abernathey, with significant contributions from Kerry Key. By separating the book from the class, we hope to create an open-source community resource for python education in the Earth and Environmental Sciences.
@@ -1317,7 +1317,7 @@ Xarray is inspired by and borrows heavily from pandas, the popular data analysis
Author: Project Pythia, Julia Kent Affiliation:NCAR
+
Author: Julia Kent, Project Pythia Affiliation:NCAR
Recording from the Python Tutorial Seminar Series designed to teach you Python, not package specific syntax. This lessons covers setting up a work environment and opening a .txt file. The content to follow along with this video is hosted on the Xdev Python Tutorial website.
@@ -1508,7 +1508,7 @@ Xarray is inspired by and borrows heavily from pandas, the popular data analysis
Author: Project Pythia, Julia Kent Affiliation:NCAR
+
Author: Julia Kent, Project Pythia Affiliation:NCAR
Recording from the Python Tutorial Seminar Series designed to teach you Python, not package specific syntax. This lessons covers creating a data dictionary. The content to follow along with this video is hosted on the Xdev Python Tutorial website.
@@ -1531,7 +1531,7 @@ Xarray is inspired by and borrows heavily from pandas, the popular data analysis
Author: Project Pythia, Julia Kent Affiliation:NCAR
+
Author: Julia Kent, Project Pythia Affiliation:NCAR
Recording from the Python Tutorial Seminar Series designed to teach you Python, not package specific syntax. This lessons covers how to write and call functions in Python. The content to follow along with this video is hosted on the Xdev Python Tutorial website.
@@ -1554,7 +1554,7 @@ Xarray is inspired by and borrows heavily from pandas, the popular data analysis
Author: Project Pythia, Julia Kent Affiliation:NCAR
+
Author: Julia Kent, Project Pythia Affiliation:NCAR
Recording from the Python Tutorial Seminar Series designed to teach you Python, not package specific syntax. This lessons covers how to create and call modules and packages. The content to follow along with this video is hosted on the Xdev Python Tutorial website.
@@ -1577,7 +1577,7 @@ Xarray is inspired by and borrows heavily from pandas, the popular data analysis
Author: Project Pythia, Julia Kent Affiliation:NCAR
+
Author: Julia Kent, Project Pythia Affiliation:NCAR
Recording from the Python Tutorial Seminar Series designed to teach you Python, not package specific syntax. This lessons covers how to use your first external buil-in package, `math`, and how to publish your package. The content to follow along with this video is hosted on the Xdev Python Tutorial website.
@@ -1646,7 +1646,7 @@ Xarray is inspired by and borrows heavily from pandas, the popular data analysis
Recording from the Python Tutorial Seminar Series introducing the Python Package `matplotlib`. The content to follow along with this video is hosted on this Matplotlib Tutorial GitHub Repository.
@@ -1740,7 +1740,7 @@ Xarray is inspired by and borrows heavily from pandas, the popular data analysis
Author: Max Grover, Project Pythia, Drew Camron Affiliation:NCAR
+
Author: Drew Camron, Max Grover, Project Pythia Affiliation:NCAR
Recording from the Python Tutorial Seminar Series introducing the Python Package `pandas`. The content to follow along with this video is hosted in this Pandas Tutorial GitHub Repository.
@@ -1855,7 +1855,7 @@ Xarray is inspired by and borrows heavily from pandas, the popular data analysis
Recording from the Python Tutorial Seminar Series introducing advanced plotting techniques and highlighting tools developed by GeoCAT. The content to follow along with this video is hosted in this Plotting with GeoCat GitHub Repository.
The 2024 Pythia Cookbook Cook-Off Hackathon will take place June
+
+
The 2024 Pythia Cookbook Cook-Off Hackathon will take place June
10 - 14, at the NCAR Mesa Lab, located in Boulder, Colorado. Save
the date. More details coming soon!
The 2024 Pythia Cookbook Cook-Off Hackathon will take place June
+
+
The 2024 Pythia Cookbook Cook-Off Hackathon will take place June
10 - 14, at the NCAR Mesa Lab, located in Boulder, Colorado. Save
the date. More details coming soon!
The 2024 Pythia Cookbook Cook-Off Hackathon will take place June
+
+
The 2024 Pythia Cookbook Cook-Off Hackathon will take place June
10 - 14, at the NCAR Mesa Lab, located in Boulder, Colorado. Save
the date. More details coming soon!
The 2024 Pythia Cookbook Cook-Off Hackathon will take place June
+
+
The 2024 Pythia Cookbook Cook-Off Hackathon will take place June
10 - 14, at the NCAR Mesa Lab, located in Boulder, Colorado. Save
the date. More details coming soon!
Pythia Cookbook Cook-Off Hackathon 2024 - Save the Date!
The 2024 Pythia Cookbook Cook-Off Hackathon will take place June
10 - 14, at the NCAR Mesa Lab, located in Boulder, Colorado. Save
the date. More details coming soon!
A tutorial for getting started with Python aimed at scientists with experience in at least one other coding language. Designed to teach you Python, not package specific syntax.
+
Introduction to Python for Atmospheric Science and Meteorology. Unidata is working to create a collection of online training materials focused on the use of Python in the atmospheric sciences. While our examples and scenarios may feature Unidata tools and data technologies, our aim is to present a generic ... more
Introduction to Python for Atmospheric Science and Meteorology. Unidata is working to create a collection of online training materials focused on the use of Python in the atmospheric sciences. While our examples and scenarios may feature Unidata tools and data technologies, our aim is to present a generic set of freely available tools that are generally useful to scientists, educators, and students in the geosciences, broadly defined.
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Jupyter notebooks are a great way to have code, output, images, video, and other information in one place. Notebooks are an ideal tool for the student, research scientist, and even software developer. In this lesson we will go over the basic features of Jupyter notebooks and how to use them.
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Author: Ryan Abernathey, Kerry Key Affiliation: Lamont-Doherty Earth Observatory
+
This book grew out of a course developed at Columbia University called Research Computing in Earth Science. It was written mostly by Ryan Abernathey, with significant contributions from Kerry Key. By separating the book from the class, we hope to create an open-source community resource for python education ... more
+
+
+
+
+
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An Introduction to Earth and Environmental Data Science
This book grew out of a course developed at Columbia University called Research Computing in Earth Science. It was written mostly by Ryan Abernathey, with significant contributions from Kerry Key. By separating the book from the class, we hope to create an open-source community resource for python education in the Earth and Environmental Sciences.
+
Author: Brian Rose Affiliation: University of Albany
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A hands on approach to climate physics and climate modeling. Fundamental climate processes are introduced through interactive and reproducible Python-based modeling exercises. This JupyterBook serves as a course textbook at the University of Albany.
+
Author: Earth Lab Affiliation: University of Colorado Boulder
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Earth analytics is an intermediate, multidisciplinary course that addresses major questions in Earth science and teaches students to use the analytical tools necessary to undertake exploration of heterogeneous ‘big scientific data’. This course is designed for graduate students and students participating ... more
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Earth Analytics Python Course
+Author: Earth Lab
+
+Affiliation: University of Colorado Boulder
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Earth analytics is an intermediate, multidisciplinary course that addresses major questions in Earth science and teaches students to use the analytical tools necessary to undertake exploration of heterogeneous ‘big scientific data’. This course is designed for graduate students and students participating in the Earth Data Analytics Professional Certificate.
+
Author: eScience Institute Affiliation: University of Washington
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Geohackweek is a 5-day hackweek to be held at the University of Washington eScience Institute. Tutorials from the hackweek are available for everyone to follow (participants and non-participants alike).
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We believe every researcher should know how to write short programs that clean and analyze data in a reproducible way and how to use version control to keep track of what they have done. But just as some astronomers spend their careers designing telescopes, some researchers focus on building the software ... more
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Research Software Engineering with Python
+Author: Damien Irving, et al.
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We believe every researcher should know how to write short programs that clean and analyze data in a reproducible way and how to use version control to keep track of what they have done. But just as some astronomers spend their careers designing telescopes, some researchers focus on building the software that makes research possible. People who do this are called research software engineers; the aim of this book is to get you ready for this role by helping you go from writing code for yourself to creating tools that help your entire field advance.
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"Data Analysis with Python: Zero to Pandas" is a practical and beginner-friendly introduction to data analysis covering the basics of Python, Numpy, Pandas, Data Visualization, and Exploratory Data Analysis.
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Author: Jay Gopalakrishnan Affiliation: Portland State University
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In this course, we will have multiple occasions to procure, analyze, and visualize data. We will study mathematical and statistical techniques to discern patterns in complex data. We shall do so in an ecosystem of python computing modules developed by open-source enthusiasts worldwide.
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Author:Philip Austin Affiliation: University of British Columbia
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This course teaches radiation and remote sensing, but also covers: how to write clear, documented and tested code that can ingest, manipulate and display data, and how to turn equations into computer algorithms in Python.
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The goal of this lesson is to provide an introduction to core geospatial data concepts. It is intended for learners who have no prior experience working with geospatial data, and as a pre-requisite for the R for Raster and Vector Data lesson . This lesson can be taught in approximately 75 minutes and ... more
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Introduction to Geospatial Concepts
+Author: The Carpentries
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The goal of this lesson is to provide an introduction to core geospatial data concepts. It is intended for learners who have no prior experience working with geospatial data, and as a pre-requisite for the R for Raster and Vector Data lesson . This lesson can be taught in approximately 75 minutes and covers the following topics: Introduction to raster and vector data format and attributes, examples of data types commonly stored in raster vs vector format, an introduction to categorical vs continuous raster data and multi-layer rasters, an introduction to the file types and R packages used in the remainder of this workshop, an introduction to coordinate reference systems and the PROJ4 format, and an overview of commonly used programs and applications for working with geospatial data.
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contextily is a small Python 3 (3.6 and above) package to retrieve tile maps from the internet. It can add those tiles as basemap to matplotlib figures or write tile maps to disk into geospatial raster files. Bounding boxes can be passed in both WGS84 (EPSG:4326) and Spheric Mercator (EPSG:3857).
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Welcome to the taster guide for contextily, the package for contextual tiles in Python. In this notebook, we will show the basic functionality available in contextily, a package to work with web-tiles for background maps. To do that, we will use additional data to illustrate contextily can be integrated ... more
Welcome to the taster guide for contextily, the package for contextual tiles in Python. In this notebook, we will show the basic functionality available in contextily, a package to work with web-tiles for background maps. To do that, we will use additional data to illustrate contextily can be integrated with other libraries such as geopandas and rasterio.
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Dask is a parallel computing library that scales the existing Python ecosystem. This tutorial will introduce Dask and parallel data analysis more generally.
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The examples below show GeoCAT-comp functions being utilized in real-world use cases. They also demonstrate how GeoCAT-comp can be used to make plots with Matplotlib (using Cartopy) and PyNGL (work in progress).
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GeoPandas is an open source project to make working with geospatial data in python easier. GeoPandas extends the datatypes used by pandas to allow spatial operations on geometric types. Geometric operations are performed by shapely. Geopandas further depends on fiona for file access and matplotlib for ... more
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GeoPandas Documentation
+Author: GeoPandas developers
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+
GeoPandas is an open source project to make working with geospatial data in python easier. GeoPandas extends the datatypes used by pandas to allow spatial operations on geometric types. Geometric operations are performed by shapely. Geopandas further depends on fiona for file access and matplotlib for plotting.
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Examples that show off the functionality in GeoPandas. They highlight many of the things you can do with this package, and show off some best-practices.
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hvPlot provides a high-level plotting API built on HoloViews that provides a general and consistent API for plotting data in all the abovementioned formats. hvPlot can integrate neatly with the individual libraries if an extension mechanism for the native plot APIs is offered, or it can be used as a ... more
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hvPlot
+Author: HoloViz developers
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hvPlot provides a high-level plotting API built on HoloViews that provides a general and consistent API for plotting data in all the abovementioned formats. hvPlot can integrate neatly with the individual libraries if an extension mechanism for the native plot APIs is offered, or it can be used as a standalone component.
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The user guide provides a detailed introduction to the API and features of hvPlot. In the Introduction you will learn how to activate the plotting API and start using it. Next you will learn to use the API for tabular data and get an overview of the types of plots you can generate and how to customize ... more
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hvPlot Tutorial
+Author: HoloViz developers
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The user guide provides a detailed introduction to the API and features of hvPlot. In the Introduction you will learn how to activate the plotting API and start using it. Next you will learn to use the API for tabular data and get an overview of the types of plots you can generate and how to customize them; including how to customize interactivity using widgets. Next is an overview on how to display and save plots in the notebook, on the commandline, and from a script. Another section will introduce you to generating subplots from your data. Once the basics are covered you can learn how to use the plotting API for specific types of data including streaming data, gridded data network graphs, geographic data, and timeseries data.
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This page contains more in-depth guides for using Matplotlib. It is broken up into beginner, intermediate, and advanced sections, as well as sections covering specific topics.
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MetPy is a modern meteorological open-source toolkit for Python. It is a maintained project of Unidata to serve the academic meteorological community. MetPy consists of three major areas of functionality: plots, calculations, and file i/o.
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Unidata Numpy tutorial that covers how to create an array of ‘data’, perform basic calculations on this data using python math functions, and slice and index the array.
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NumPy provides Python with a powerful array processing library and an elegant syntax that is well suited to expressing computational algorithms clearly and efficiently. We'll introduce basic array syntax and array indexing, review some of the available mathematical functions in NumPy, and discuss how ... more
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Intro to Numerical Computing with NumPy
+Author: A. Chabot-LeClerc
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+Affiliation:Enthought
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NumPy provides Python with a powerful array processing library and an elegant syntax that is well suited to expressing computational algorithms clearly and efficiently. We'll introduce basic array syntax and array indexing, review some of the available mathematical functions in NumPy, and discuss how to write your own routines. Along the way, we'll learn just enough about matplotlib to display results from our examples.
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Pandas is a fast, powerful, flexible and easy to use open source data analysis and manipulation tool, built on top of the Python programming language.
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Geographic information systems use GeoTIFF and other formats to organize and store gridded raster datasets such as satellite imagery and terrain models. Rasterio reads and writes these formats and provides a Python API based on Numpy N-dimensional arrays and GeoJSON.
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This document explains how to use Rasterio to read existing files and to create new files. Some advanced topics are glossed over to be covered in more detail elsewhere in Rasterio’s documentation.
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Siphon is a collection of Python utilities for downloading data from remote data services. Much of Siphon’s current functionality focuses on access to data hosted on a THREDDS Data Server. It also provides clients to a variety of simple web services.
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An overview on Siphon from the Unidata Python Workshop that: uses Siphon to access a THREDDS catalog, filters data, and uses Siphon to perform remote data access.
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Examples of how wrf-python can be used to make plots with matplotlib (with basemap and cartopy) and PyNGL. None of these examples make use of xarray’s builtin plotting functions, since additional work is most likely needed to extend xarray in order to work correctly.
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xarray (formerly xray) is an open source project and Python package that makes working with labelled multi-dimensional arrays simple, efficient, and fun!
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Xarray introduces labels in the form of dimensions, coordinates and attributes on top of raw NumPy-like arrays, which allows for a more intuitive, … more
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Xarray
+Author: Xarray Developers
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xarray (formerly xray) is an open source project and Python package that makes working with labelled multi-dimensional arrays simple, efficient, and fun!
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Xarray introduces labels in the form of dimensions, coordinates and attributes on top of raw NumPy-like arrays, which allows for a more intuitive, more concise, and less error-prone developer experience. The package includes a large and growing library of domain-agnostic functions for advanced analytics and visualization with these data structures.
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Xarray is inspired by and borrows heavily from pandas, the popular data analysis package focused on labelled tabular data. It is particularly tailored to working with netCDF files, which were the source of xarray’s data model, and integrates tightly with dask for parallel computing.
An introduction to Xarray through the Unidata Python Workshop that asks, "What is XArray and how does XArray fit in with Numpy and Pandas?"" by creating a DataArray, openning netCDF data using XArray, and subsetting the data.
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Lesson materials for a one-day workshop on using Python in the atmosphere and ocean sciences. Useful for any geoscientist working with raster (a.k.a. “gridded”) data, the lessons cover packages/tools including conda, xarray, dask and netCDF, as well as best practices including functions, command line ... more
Lesson materials for a one-day workshop on using Python in the atmosphere and ocean sciences. Useful for any geoscientist working with raster (a.k.a. “gridded”) data, the lessons cover packages/tools including conda, xarray, dask and netCDF, as well as best practices including functions, command line programs, defensive programming, provenance tracking and version control via git/GitHub.
A living, open and community-driven resource to showcase and support computational notebooks for collaborative, reproducible and transparent Environmental Science
Author: Julia Kent, Project Pythia Affiliation:NCAR
+
Recording from the Python Tutorial Seminar Series designed to teach you Python, not package specific syntax. This lessons covers setting up a work environment and opening a .txt file. The content to follow along with this video is hosted on the Xdev Python Tutorial website.
+
Author: Julia Kent, Project Pythia Affiliation:NCAR
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Recording from the Python Tutorial Seminar Series designed to teach you Python, not package specific syntax. This lessons covers creating a data dictionary. The content to follow along with this video is hosted on the Xdev Python Tutorial website.
+
Author: Julia Kent, Project Pythia Affiliation:NCAR
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Recording from the Python Tutorial Seminar Series designed to teach you Python, not package specific syntax. This lessons covers how to write and call functions in Python. The content to follow along with this video is hosted on the Xdev Python Tutorial website.
+
Author: Julia Kent, Project Pythia Affiliation:NCAR
+
Recording from the Python Tutorial Seminar Series designed to teach you Python, not package specific syntax. This lessons covers how to create and call modules and packages. The content to follow along with this video is hosted on the Xdev Python Tutorial website.
+
Author: Julia Kent, Project Pythia Affiliation:NCAR
+
Recording from the Python Tutorial Seminar Series designed to teach you Python, not package specific syntax. This lessons covers how to use your first external buil-in package, `math`, and how to publish your package. The content to follow along with this video is hosted on the Xdev Python Tutorial website.
+
Recording from the Python Tutorial Seminar Series introducing the Python Package `numpy`. The content to follow along with this video is hosted on this Numpy Google Collab.
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Recording from the Python Tutorial Seminar Series introducing the Python Package `matplotlib`. The content to follow along with this video is hosted on this Matplotlib Tutorial GitHub Repository.
+
Recording from the Python Tutorial Seminar Series introducing the Python Package `cartopy`. The content to follow along with this video is hosted in this Cartopy Tutorial GitHub Repository.
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Author: Kevin Paul, Project Pythia Affiliation:NCAR
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Recording from the Python Tutorial Seminar Series introducing the tools Git and GitHub. The content to follow along with this tutorial is hosted in this Git and GitHub Demo GitHub Repository.
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Author: Drew Camron, Max Grover, Project Pythia Affiliation:NCAR
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Recording from the Python Tutorial Seminar Series introducing the Python Package `pandas`. The content to follow along with this video is hosted in this Pandas Tutorial GitHub Repository.
+
Author: Anderson Banihirwe, Project Pythia Affiliation:NCAR
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Recording from the Python Tutorial Seminar Series introducing the Python Package `xarray`. This is the first lesson of a two part series. The content to follow along with this video is hosted in this Xarray Tutorial GitHub Repository.
+
Author: Anderson Banihirwe, Project Pythia Affiliation:NCAR
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Recording from the Python Tutorial Seminar Series introducing the Python Package `xarray`. This is the second lesson of a two part series. The content to follow along with this video is hosted in this Xarray Tutorial GitHub Repository.
+
Author: Anderson Banihirwe, Project Pythia Affiliation:NCAR
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Recording from the Python Tutorial Seminar Series introducing the Python Package `dask`. This is the first lesson of a two part series. The content to follow along with this video is hosted in this Xarray Tutorial GitHub Repository.
+
Author: Anderson Banihirwe, Project Pythia Affiliation:NCAR
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Recording from the Python Tutorial Seminar Series introducing the Python Package `dask`. This is the second lesson of a two part series. The content to follow along with this video is hosted in this Xarray Tutorial GitHub Repository.
+
Recording from the Python Tutorial Seminar Series introducing advanced plotting techniques and highlighting tools developed by GeoCAT. The content to follow along with this video is hosted in this Plotting with GeoCat GitHub Repository.
+
Recording from the Python Tutorial Seminar Series introducing `geocat-comp`. The content to follow along with this video is hosted in this GeoCat-Comp GitHub Repository.
+
Brought to you by Project Pythia, this growing collection covers the foundational skills everyone needs to get started with scientific computing in the open-source Python ecosystem.
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This chapter of the Pythia Foundations book covers Python spin-up for new users. Here you will look at your first Python code and learn to run/install Python on various platforms.
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This chapter of the Pythia Foundations book covers Python spin-up using Jupyter. Here you will learn about the JupyterLab interface and markdown formatting.
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This chapter of the Pythia Foundations book introduces the Python package Cartopy, a package designed for geospatial data processing and used for its ability to produce maps.
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This section of the Pythia Foundations book contains tutorials on dealing with times and calendars in scientific Python, beginning with use of the datetime standard library.
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This section of the Pythia Foundations book covers Pandas, a very powerful library for working with tabular data (i.e. anything you might put in a spreadsheet – a common data type in the geosciences).
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This section of the Pythia Foundations book covers how to interact in Python with data file formats in widespread use in the geosciences, such as NetCDF.
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This section of the Pythia Foundations book contains tutorials on using Xarray. Xarray is used widely in the geosciences and beyond for analysis of gridded N-dimensional datasets.
+
Climatematch Academy (CMA) is a wide-reaching, inclusive and approachable program aimed to introduce computational methods for climate science. CMA strives to create a globally diverse climate sciences community, trained on cutting edge techniques to access and analyze open-source modeled and observational ... more
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Climatematch Academy
+Author: Climatematch Team
+
+
Climatematch Academy (CMA) is a wide-reaching, inclusive and approachable program aimed to introduce computational methods for climate science. CMA strives to create a globally diverse climate sciences community, trained on cutting edge techniques to access and analyze open-source modeled and observational climate data.
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A guide to analyze and plot Earth Science data for Scientist of all programming skill levels, using L-1 data product from CYGNSS mission as an example.
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@@ -302,7 +2340,7 @@
Contribute
By the Project Pythia Community.
- Last updated on 2 February 2024.
+ Last updated on 3 February 2024.
By the Project Pythia Community.
- Last updated on 2 February 2024.
+ Last updated on 3 February 2024.
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+++ b/_preview/396/searchindex.js
@@ -1 +1 @@
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Contribute
By the Project Pythia Community. - Last updated on 2 February 2024. + Last updated on 3 February 2024.