NAMESPACE

# Generated by roxygen2: do not edit by hand

export(MotifSetup)
export(add_local_file)
export(getPlotSetArray)
export(getREF)
export(import.narrowPeak)
export(plot)
export(plotAverage)
export(plotHeatmap)
export(run)
exportClasses(MotifSetup)
exportClasses(PlotSetArray)
exportClasses(PlotSetList)
exportClasses(PlotSetPair)
import(BSgenome)
import(Biostrings)
import(DBI)
import(DT)
import(GenomeInfoDb)
import(GenomicAlignments)
import(GenomicRanges)
import(IRanges)
import(RColorBrewer)
import(RSQLite)
import(Rsamtools)
import(digest)
import(ggplot2)
import(gridExtra)
import(jsonlite)
import(methods)
import(parallel)
import(reshape2)
import(rtracklayer)
importFrom(S4Vectors,recycleIntegerArg)
importFrom(class,somgrid)
importFrom(fields,image.plot)
importFrom(fields,imageplot.info)
importFrom(fields,imageplot.setup)
importFrom(fields,poly.image)
importFrom(fields,set.panel)
importFrom(fields,tim.colors)
importFrom(grid,gpar)
importFrom(grid,grid.draw)
importFrom(grid,textGrob)
importFrom(kohonen,supersom)
importFrom(plotrix,dispersion)
importFrom(shiny,runApp)