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ci.yml
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name: CI
on: [push]
# Automatically stop old builds on the same branch/PR
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
defaults:
run:
shell: bash -el {0}
jobs:
pre-commit-checks:
name: Pre-commit Checks
timeout-minutes: 30
runs-on: ubuntu-latest
steps:
- name: Checkout branch
uses: actions/checkout@v4
- name: Set up pixi
uses: prefix-dev/setup-pixi@v0.8.1
with:
environments: default lint
- name: pre-commit
run: pixi run pre-commit-run --color=always --show-diff-on-failure
mypy-example-nbs:
name: Check notebooks mypy
timeout-minutes: 5
runs-on: ubuntu-latest
steps:
- name: Checkout branch
uses: actions/checkout@v4
- name: Set up pixi
uses: prefix-dev/setup-pixi@v0.8.1
- name: Run mypy
run: |
pixi run jupyter nbconvert --TagRemovePreprocessor.enabled=True --TagRemovePreprocessor.remove_cell_tags no-convert --to script docs/examples/*.ipynb
for file in docs/examples/*.txt; do mv -- "$file" "${file%.txt}.py"; done
pixi run mypy docs/examples/*.py
unit-tests:
name: Unit Tests
timeout-minutes: 30
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, macos-latest, windows-latest]
env: ["py310", "py311", "py312"]
steps:
- name: Checkout branch
uses: actions/checkout@v4
- name: Set up pixi
uses: prefix-dev/setup-pixi@v0.8.1
with:
environments: ${{ matrix.env }}
- name: Install repository and generate code coverage report
run: |
pixi run -e ${{ matrix.env }} postinstall
pixi run -e ${{ matrix.env }} coverage
- name: Upload coverage reports to Codecov
if: matrix.env == 'py312' && matrix.os == 'ubuntu-latest'
uses: codecov/codecov-action@v3.1.3
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
file: ./coverage.xml