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I'm seeing this too. Looks like the is techmap is out-of-date. I compared with qlal4s3b_cell_macro in my x86_64 build and it has the Sys_Clk0 port.
I needed to replace these files with the x86_64 install version (and was able to get it resolved):
symbiflow/quicklogic-arch-defs/share/techmaps/quicklogic/pp3/techmap/cells_map.v
symbiflow/share/yosys/quicklogic/pp3_cells_sim.v
symbiflow/share/yosys/quicklogic/pp3_cells_map.
quicklogic-yosys/techlibs/quicklogic/pp3_cells_sim.v
quicklogic-yosys/techlibs/quicklogic/pp3_cells_map.v
quicklogic-yosys/share/quicklogic/pp3_cells_sim.v
quicklogic-yosys/share/quicklogic/pp3_cells_map.v
Attempting to build docker locally with :
Fails with :
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