config_prediction_finetune_template.yaml

# Mode
mode: "Predict"

predict_file: "/home/ubuntu/scgenai/examples/data/example_fintuneval.h5ad"
batch_size: 1 # set this based on GPU memory, higher batch_size higher training speed, but also much more GPU memory will be used
model_dir: "/home/ubuntu/scgenai/examples/testrun/test1/best_model/" # Path to the pretrained model
outputfile: "/home/ubuntu/scgenai/examples/testrun/test1/test.Predict.csv"