.gitignore

#This file exists to stop the addition of forbidden files into the github
#respository #Such forbidden files are images, movies, and various dotfiles
#(such as .DS_store on mac). This .gitignore file will be common to all
#repositories and should be the first file that is committed.

#Everyone makes their own graphics path based on the location of Dropbox on their computer
graphicspath.tex

#Ignore trash dotfiles.
*.DS_store

#Ignore shortcuts (on Windows)
*.lnk

#Ignore latex garbage.
*.swp
*.log
*.aux
*.bbl

#Ignore images
*.jpg
*.tif*
*.eps
*.ai
*.aitt 
*.svg
*.bmp
*.hdr

#Ignore movies and audio
*.mp4 
*.mov 
*.avi
*.wav
*.mp3

#Ignore Microsoft, Apple, and PDF documents.
*.ppt*
*.doc*
*.xsl*
*.numbers
*.pages
*.key
*.pdf

#Ignore LaTeX helper files
*.blg
*.out
*.synctex.gz

#Ignore various code garbage.
*.pyc
*.ipynb_checkpoints*

#Ignore local copies of the raw data
/data/flow/*
/data/microscopy/*
/data/csv/*samples.csv
/data/*samples.csv
/data/mcmc/*
/data/misc/*
data/images/
/data/plate_reader/*
/data_files/
doc/induction_paper/graphicspath.tex
/code/figures/dropbox_path.txt

# Ignore notazble large files
/data/csv/DBL_error_sampling.csv
_site/


# Plot garbage. 
*.json