+
+
+[](https://github.com/RVerse-Tutorials/DataProduct/releases)
+[](https://github.com/RVerse-Tutorials/DataProduct/actions/workflows/R-CMD-check.yaml)
+
+
+This is a template for a NMFS branded R package and pkgdown website. It will have a NMFS palette, appropriate license and disclaimer, and a NMFS footer with logo.
+
+The instructions will use the **usethis** and **pkgdown** packages. So install those.
+
+## Step 1 Make sure the package builds
+
+1. Clone this GitHub repository and then open the new repository (on your computer).
+2. Set-up your RStudio project to use Roxygen for documentation and NAMESPACE
+ * Tools > Project Options... > Build Tools Click the checkbox that says "Build documentation with Roxygen".
+ * The Configure popup box for Roxygen will probably appear, if not click the Configure button. Check all the checkboxes.
+3. On the Build tab, click Install and Restart to make sure it builds.
+4. On the Build tab, click Check to make sure it passes all the checks.
+5. Type the code `pkgdown::build_site()` and make sure the **pkgdown** building works. If on RStudio Cloud, you will need to use `pkgdown::build_site(override = list(destination = "~/docs"))` to
+
+Note steps 3 and 4 are to make sure your computer is set up to build and check packages. As long as you haven't edited the package yet, it will build and pass check.
+
+## Step 2 Customize your package
+
+1. Edit the DESCRIPTION file (change Title, Description, urls for repo, Authors)
+2. Add any required packages to Depends (or Imports* or Suggests*).
+3. Edit the Readme.Rmd file.
+4. Add your functions to the R folder. There are some template functions there already.
+5. Don't touch the man folder. Roxygen2 will make your Rd files.
+
+## Step 3 Make some vignettes (optional)
+
+Vignettes are longform examples and are Rmd files in the `vignettes` folder. Easiest way to start a new vignette is `usethis::use_vignette("vignettename")`.
+
+## Step 4 Customize your **pkgdown** site and build
+
+1. Structure of the upper navbar. Edit `_pkgdown.yml` in the `pkddown` folder to change the look of the upper navbar. There are endless options. Find examples from other peoples' pkgdown sites.
+2. Update your logo and favicons. Logo is in `man/figures`. After updating run `pkgdown::build_favicon()` to remake the favicons.
+3. Add material to the `docs` folder as needed. See the example for the References tab in the `_pkgdown.yml`.
+4. Build your site with `pkgdown::build_site()`.
+
+## Step 5 Make your site live on GitHub
+
+1. Push the changes to GitHub.
+2. Click on Settings for the repository.
+3. Scroll way down to the GitHub Pages section.
+4. In the **Source** section, change branch to Main and folder to `docs`. There are other ways to set up GitHub Pages but this will get you started.
+5. I always add my GitHub Pages URL to the repo description (on right when on your main repo page).
+
+## NMFS Branding
+
+This template has the following branding elements.
+
+1. `extra.css` in the `pkgdown` folder sources the **nmfspalette** css. This get you the colors.
+2. The `Readme.Rmd` file sources the NMFS Disclaimer and footer with NMFS logo from the [FIT Resources](https://github.com/nmfs-fish-tools/Resources).
+3. The LICENSE is set to that used by [FIT packages](https://github.com/nmfs-fish-tools).
+
+## GitHub Actions and Badges
+
+In the `.github` folder is just one action, to run R CMD check on the package.
+
+## Readme File
+
+**pkgdown** uses `Readme.md` but to pull in the Disclaimer and footer from FIT, you need a Rmd file. When you update the `Readme.Rmd` file, **you need to remember to knit the file** to update `Readme.md`.
+
+
+
+****
+
+```{r add-disclaimer, echo=FALSE, results='asis'}
+url <- "https://raw.githubusercontent.com/nmfs-fish-tools/Resources/master/Disclaimer.md"
+childtext <- readLines(url)
+cat(childtext, sep="\n")
+```
+
+****
+
+```{r footer, echo=FALSE, results='asis'}
+url <- "https://raw.githubusercontent.com/nmfs-fish-tools/Resources/master/footer.md"
+childtext <- readLines(url)
+cat(childtext, sep="\n")
+```
+
+
diff --git a/README.md b/README.md
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+
+
+# DataProduct 
+
+[U.S. Department of Commerce](https://www.commerce.gov/) \| [National
+Oceanographic and Atmospheric Administration](https://www.noaa.gov) \|
+[NOAA Fisheries](https://www.fisheries.noaa.gov/)
diff --git a/data/cars.rda b/data/cars.rda
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diff --git a/data/iris2.rda b/data/iris2.rda
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diff --git a/docs/404.html b/docs/404.html
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+
+
+
+
+##
+## Attaching package: 'DataProduct'## The following object is masked from 'package:datasets':
+##
+## carsHere you can show uses worked up examples for your package. The easiest way to make a new package is to use usethis::use_vignette("nameofvignette").
+
+
+
+ Let’s make a plot! +
+
+require(stats)
+x <- runif(10)
+y <- 10 + 3*x + rnorm(10)
+sampleplot(x, y)## (Intercept) x
+## 10.376958 1.943484
+title(samplefunction("x versus y", y="10 vals", z="green"))
