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Connect to ENCODE #2

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bschilder opened this issue Apr 1, 2022 · 1 comment

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bschilder commented Apr 1, 2022

Add API to import data from ENCODE directly.
DeepBlueR seems like a good candidate package to do this, but is extremely complicated to use:
https://www.bioconductor.org/packages/devel/bioc/vignettes/DeepBlueR/inst/doc/DeepBlueR.html

bschilder added this to 🦇🦇 echoverse 🦇🦇

bschilder self-assigned this

bschilder moved this to Todo in 🦇🦇 echoverse 🦇🦇

bschilder added the enhancement label

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bschilder commented Sep 12, 2022 •

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Now handled by PeakyFinders, but needs to be integrated into echoverse.
https://github.com/neurogenomics/PeakyFinders

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