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setup.py
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setup.py
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#!/usr/bin/env python
# -*- coding: utf-8 -*-
################################################################################
#
# PyDAS - A Python wrapper to several differential algebraic system solvers
#
# Copyright (c) 2010-2015 by Joshua W. Allen (joshua.w.allen@gmail.com),
# Connie W. Gao (connie.w.gao@gmail.com) and the
# Reaction Mechanism Generator Team (rmg_dev@mit.edu)
#
# Permission is hereby granted, free of charge, to any person obtaining a
# copy of this software and associated documentation files (the 'Software'),
# to deal in the Software without restriction, including without limitation
# the rights to use, copy, modify, merge, publish, distribute, sublicense,
# and/or sell copies of the Software, and to permit persons to whom the
# Software is furnished to do so, subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included in
# all copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED 'AS IS', WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
# FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
# DEALINGS IN THE SOFTWARE.
#
################################################################################
import numpy
import sys
if __name__ == '__main__':
# Use setuptools by default (requires Python>=2.6) if available
# If not available, fall back to distutils
# Using setuptools enables support for compiling wheels
try:
from setuptools import setup, Extension
except ImportError:
from distutils.core import setup
from distutils.extension import Extension
from Cython.Distutils import build_ext
# Turn on HTML annotation file generation
import Cython.Compiler.Options
Cython.Compiler.Options.annotate = True
# The Cython extension modules to compile
observer_ext = Extension(
'pydas.observer',
['pydas/observer.pyx'],
include_dirs=['pydas'],
)
pydas_ext = Extension(
'pydas.dassl',
['pydas/dassl.pyx'],
include_dirs=['pydas', numpy.get_include()],
libraries=['gfortran','quadmath'],
extra_objects=['dassl/daux.o','dassl/ddassl.o','dassl/dlinpk.o'],
)
pydaspk_ext = Extension(
'pydas.daspk',
['pydas/daspk.pyx'],
include_dirs=['pydas', numpy.get_include()],
libraries=['gfortran','quadmath'],
extra_objects=['daspk31/solver/adf_dummy.o','daspk31/solver/daux.o','daspk31/solver/ddaspk.o','daspk31/solver/dlinpk.o','daspk31/solver/dsensd.o','daspk31/solver/mpi_dummy.o'],
)
modules = ['pydas.dassl', 'pydas.observer', 'pydas.daspk']
extensions = [pydas_ext, observer_ext, pydaspk_ext]
# Read the version number
exec(open('pydas/version.py').read())
# Run the setup command
setup(name='pydas',
version=__version__,
description='A Python wrapper to several differential algebraic system solvers',
author='Joshua W. Allen, Connie W. Gao, and the Reaction Mechanism Generator Team',
author_email='rmg_dev@mit.edu',
url='http://github.com/ReactionMechanismGenerator/PyDAS',
py_modules= modules,
packages = ['pydas'],
package_data = {'pydas': ['*.pxd']},
cmdclass = {'build_ext': build_ext},
ext_modules = extensions
)