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errors in afni recipe #484

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Remi-Gau opened this issue Jan 3, 2023 · 1 comment
Closed

errors in afni recipe #484

Remi-Gau opened this issue Jan 3, 2023 · 1 comment

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@Remi-Gau
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Remi-Gau commented Jan 3, 2023

Using this basic command but the output image has a couple of issues

	docker run --rm -it kaczmarj/neurodocker:0.9.1 \
		generate docker \
			--base-image debian:bullseye-slim \
			--pkg-manager apt \
			--afni method=binaries version=latest \
			--run "curl -sL https://deb.nodesource.com/setup_18.x | bash -" \
			--install "nodejs" \
			--run "node --version && npm --version && npm install -g [email protected]" \
		> afni/Dockerfile

Cannot build the image because of

    && rm -rf /var/lib/apt/lists/* \
    &&  \                                < --- This line should not be there
    && gsl_path="$(find / -name 'libgsl.so.??' || printf '')" \
    && if [ -n "$gsl_path" ]; then \
E: Package 'libjpeg-turbo8-dev' has no installation candidate
E: Unable to locate package multiarch-support

libjpeg-turbo8-dev can maybe be replace by libjpeg62-turbo-dev:

pahaz/docker-compose-django-postgresql-redis-example#1

@satra
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satra commented Jan 3, 2023

i think this is the same as #478 . i believe a PR is needed on two fronts. skip empty lines and update dependencies. i'll close this in favor of continuing the discussion in the other issue.

@satra satra closed this as completed Jan 3, 2023
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