diff --git a/README.md b/README.md index 930295f..82f6967 100644 --- a/README.md +++ b/README.md @@ -42,8 +42,7 @@ Overview of this tutorial - [Installation of packages](#installation-of-packages) - [How to compare methods](#how-to-compare-methods) -- [How to run real (unshuffled) - data](#how-to-run-real-(unshuffled)-data) +- [How to run original data](#how-to-run-original-data) - [Implemented methods](#implemented-methods) - [Extra features](#extra-features) @@ -122,8 +121,7 @@ in one go. If you are interested in testing treatments against a common baseline/control, you can set `out.anova = FALSE`. This will output results from the 2. level of the `predictor` compared to the intercept. This will ensure that p-values from `testDA` are comparable to the ones -for the final analysis (See more -[here](#how-to-run-real-(unshuffled)-data)). +for the final analysis (See more [here](#how-to-run-original-data)). ### *If you have a paired/blocked experimental design:* @@ -188,8 +186,8 @@ Medians for each method: summary(mytest) -How to run real (unshuffled) data -================================= +How to run original data +======================== All tests can easily be run with the original data. E.g. edgeR exact test: