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stitchAllChannels fails on NIN acq PC #211

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raacampbell opened this issue Sep 20, 2024 · 1 comment
Open

stitchAllChannels fails on NIN acq PC #211

raacampbell opened this issue Sep 20, 2024 · 1 comment

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@raacampbell
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raacampbell commented Sep 20, 2024

Error using javaclasspath
Unable to resolve the name 'com.mathworks.jmi.ClassLoaderManager.getClassLoaderManager'.

Error in javaclasspath

Error in stitchit.yaml.ReadYamlRaw (line 24)
        if not(ismember(dp, javaclasspath ('-dynamic')))

Error in stitchit.yaml.ReadYaml (line 47)
    ry = ReadYamlRaw(filename, 0, nosuchfileaction, treatasdata);

Error in readMetaData2Stitchit (line 71)
rawOut=stitchit.yaml.ReadYaml(fname,verbose);

Error in readStitchItINI (line 65)
        M=readMetaData2Stitchit;

Error in tileLoad (line 101)
userConfig=readStitchItINI;

Error in stitchSection (line 210)
parfor ii=1:size(section,1) %Tile loading is done in parallel, but it still seems faster to stitch in parallel

Error in stitchAllChannels (line 88)
    stitchSection([],chansToStitch(thisChan),'stitchedSize',stitchedSize) %Stitch all sections from this channels
----------------------------------------------------------------------------------------------------------------
MATLAB Version: 23.2.0.2428915 (R2023b) Update 4
MATLAB License Number: 649021
Operating System: Linux 6.2.0-37-generic #38~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Thu Nov  2 18:01:13 UTC 2 x86_64
Java Version: Java 1.8.0_202-b08 with Oracle Corporation Java HotSpot(TM) 64-Bit Server VM mixed mode
----------------------------------------------------------------------------------------------------------------
MATLAB                                                Version 23.2        (R2023b)
Computer Vision Toolbox                               Version 23.2        (R2023b)
Curve Fitting Toolbox                                 Version 23.2        (R2023b)
Image Processing Toolbox                              Version 23.2        (R2023b)
Parallel Computing Toolbox                            Version 23.2        (R2023b)
Signal Processing Toolbox                             Version 23.2        (R2023b)
Statistics and Machine Learning Toolbox               Version 23.2        (R2023b)
@raacampbell
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But works on -nodesktop

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