Merge pull request #522 from SciML/at/use-reusable-workflows

ci: standardize workflows using SciML's reusable workflows

.github/workflows/Documentation.yml

@@ -1,33 +1,18 @@
-name: Documentation
+name: "Documentation"
 
 on:
   push:
     branches:
       - main
-      - 'release-'
     tags: '*'
   pull_request:
 
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: ${{ github.ref_name != github.event.repository.default_branch || github.ref != 'refs/tags/v*' }}
+
 jobs:
-  build:
-    runs-on: ubuntu-latest
-    steps:
-      - uses: actions/checkout@v4
-      - uses: julia-actions/setup-julia@latest
-        with:
-          version: '1'
-      - name: Install dependencies
-        run: julia --project=docs/ -e 'using Pkg; Pkg.develop(PackageSpec(path=pwd())); Pkg.instantiate()'
-      - name: Build and deploy
-        env:
-          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} # For authentication with GitHub Actions token
-          DOCUMENTER_KEY: ${{ secrets.DOCUMENTER_KEY }} # For authentication with SSH deploy key
-        run: julia --project=docs/ --code-coverage=user docs/make.jl
-      - uses: julia-actions/julia-processcoverage@v1
-        with:
-          directories: src
-      - uses: codecov/codecov-action@v4
-        with:
-          files: lcov.info
-          token: ${{ secrets.CODECOV_TOKEN }}
-          fail_ci_if_error: true
+  build-and-deploy-docs:
+    name: "Documentation"
+    uses: "SciML/.github/.github/workflows/documentation.yml@v1"
+    secrets: "inherit"

.github/workflows/FormatCheck.yml

@@ -1,42 +1,13 @@
-name: format-check
+name: "Format Check"
 
 on:
   push:
     branches:
       - 'main'
-      - 'release-'
     tags: '*'
   pull_request:
 
 jobs:
-  build:
-    runs-on: ${{ matrix.os }}
-    strategy:
-      matrix:
-        julia-version: [1]
-        julia-arch: [x86]
-        os: [ubuntu-latest]
-    steps:
-      - uses: julia-actions/setup-julia@latest
-        with:
-          version: ${{ matrix.julia-version }}
-
-      - uses: actions/checkout@v4
-      - name: Install JuliaFormatter and format
-        # This will use the latest version by default but you can set the version like so:
-        #
-        # julia  -e 'using Pkg; Pkg.add(PackageSpec(name="JuliaFormatter", version="0.13.0"))'
-        run: |
-          julia  -e 'using Pkg; Pkg.add(PackageSpec(name="JuliaFormatter"))'
-          julia  -e 'using JuliaFormatter; format(".", verbose=true)'
-      - name: Format check
-        run: |
-          julia -e '
-          out = Cmd(`git diff --name-only`) |> read |> String
-          if out == ""
-              exit(0)
-          else
-              @error "Some files have not been formatted !!!"
-              write(stdout, out)
-              exit(1)
-          end'
+  format-check:
+    name: "Format Check"
+    uses: "SciML/.github/.github/workflows/format-suggestions-on-pr.yml@v1"

.github/workflows/Invalidations.yml

@@ -1,4 +1,4 @@
-name: Invalidations
+name: "Invalidations"
 
 on:
   pull_request:
@@ -10,31 +10,6 @@ concurrency:
   cancel-in-progress: true
 
 jobs:
-  evaluate:
-    # Only run on PRs to the default branch.
-    # In the PR trigger above branches can be specified only explicitly whereas this check should work for master, main, or any other default branch
-    if: github.base_ref == github.event.repository.default_branch
-    runs-on: ubuntu-latest
-    steps:
-    - uses: julia-actions/setup-julia@v2
-      with:
-        version: '1'
-    - uses: actions/checkout@v4
-    - uses: julia-actions/julia-buildpkg@v1
-    - uses: julia-actions/julia-invalidations@v1
-      id: invs_pr
-
-    - uses: actions/checkout@v4
-      with:
-        ref: ${{ github.event.repository.default_branch }}
-    - uses: julia-actions/julia-buildpkg@v1
-    - uses: julia-actions/julia-invalidations@v1
-      id: invs_default
-
-    - name: Report invalidation counts
-      run: |
-        echo "Invalidations on default branch: ${{ steps.invs_default.outputs.total }} (${{ steps.invs_default.outputs.deps }} via deps)" >> $GITHUB_STEP_SUMMARY
-        echo "This branch: ${{ steps.invs_pr.outputs.total }} (${{ steps.invs_pr.outputs.deps }} via deps)" >> $GITHUB_STEP_SUMMARY
-    - name: Check if the PR does increase number of invalidations
-      if: steps.invs_pr.outputs.total > steps.invs_default.outputs.total
-      run: exit 1
+  evaluate-invalidations:
+    name: "Evaluate Invalidations"
+    uses: "SciML/.github/.github/workflows/invalidations.yml@v1"

.github/workflows/Tests.yml

@@ -0,0 +1,38 @@
+name: "Tests"
+
+on:
+  pull_request:
+    branches:
+      - main
+      - 'release-'
+    paths-ignore:
+      - 'docs/**'
+  push:
+    branches:
+      - main
+    paths-ignore:
+      - 'docs/**'
+
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: ${{ github.ref_name != github.event.repository.default_branch || github.ref != 'refs/tags/v*' }}
+
+jobs:
+  tests:
+    name: "Tests"
+    strategy:
+      fail-fast: false
+      matrix:
+        version:
+          - "1"
+          - "lts"
+        group:
+          - "Core"
+          - "LinearSolveHYPRE"
+          - "LinearSolvePardiso"
+          - "LinearSolveBandedMatrices"
+    uses: "SciML/.github/.github/workflows/tests.yml@v1"
+    with:
+      group: "${{ matrix.group }}"
+      julia-version: "${{ matrix.version }}"
+    secrets: "inherit"

test/pardiso/pardiso.jl

@@ -57,21 +57,21 @@ prob = LinearProblem(copy(A), copy(b1))
 
 
 linsolve = init(prob, UMFPACKFactorization())
-sol11 = solve(linsolve)
+sol11 = solve!(linsolve)
 linsolve = LinearSolve.set_b(sol11.cache, copy(b2))
-sol12 = solve(linsolve)
+sol12 = solve!(linsolve)
 linsolve = LinearSolve.set_A(sol12.cache, copy(A2))
-sol13 = solve(linsolve)
+sol13 = solve!(linsolve)
 
 
 
 for alg in algs
     linsolve = init(prob, alg)
-    sol31 = solve(linsolve)
+    sol31 = solve!(linsolve)
     linsolve = LinearSolve.set_b(sol31.cache, copy(b2))
-    sol32 = solve(linsolve)
+    sol32 = solve!(linsolve)
     linsolve = LinearSolve.set_A(sol32.cache, copy(A2))
-    sol33 = solve(linsolve)
+    sol33 = solve!(linsolve)
     @test sol11.u ≈ sol31.u
     @test sol12.u ≈ sol32.u
     @test sol13.u ≈ sol33.u