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Precompilation fails everytime julia v1.10 is restarted. #461

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montyvesselinov opened this issue Feb 1, 2024 · 10 comments
Closed

Precompilation fails everytime julia v1.10 is restarted. #461

montyvesselinov opened this issue Feb 1, 2024 · 10 comments
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bug Something isn't working

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@montyvesselinov
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Precompilation fails everytime julia v1.10 is restarted.

✗ LinearSolve
✗ LinearSolve → LinearSolveIterativeSolversExt
✗ LinearSolve → LinearSolveFastAlmostBandedMatricesExt
✗ LinearSolve → LinearSolveKernelAbstractionsExt
✗ LinearSolve → LinearSolveBandedMatricesExt
✗ LinearSolve → LinearSolveRecursiveArrayToolsExt
✗ NonlinearSolve
✗ NonlinearSolve → NonlinearSolveZygoteExt
✗ NonlinearSolve → NonlinearSolveBandedMatricesExt
✗ NonlinearSolve → NonlinearSolveNLsolveExt

@montyvesselinov montyvesselinov added the bug Something isn't working label Feb 1, 2024
@ChrisRackauckas
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Please post the whole stack trace for using LinearSolve.

@montyvesselinov
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┌ Warning: attempting to remove probably stale pidfile
│   path = "C:\\Users\\monty\\.julia\\compiled\\v1.10\\LinearSolve\\WR6RC_EgZJk.ji.pidfile"
└ @ FileWatching.Pidfile C:\Users\monty\.julia\juliaup\julia-1.10.0+0.x64.w64.mingw32\share\julia\stdlib\v1.10\FileWatching\src\pidfile.jl:244
Precompiling LinearSolve
        Info Given LinearSolve was explicitly requested, output will be shown live
ERROR: LoadError: InitError: could not load library "C:\Users\monty\.julia\artifacts\627190b3418f9b1cfbbf9b16afba530328670386\bin\mkl_core.2.dll"
The specified module could not be found.
Stacktrace:
  [1] dlopen(s::String, flags::UInt32; throw_error::Bool)
    @ Base.Libc.Libdl .\libdl.jl:117
  [2] dlopen(s::String, flags::UInt32)
    @ Base.Libc.Libdl .\libdl.jl:116
  [3] macro expansion
    @ C:\Users\monty\.julia\packages\JLLWrappers\pG9bm\src\products\library_generators.jl:63 [inlined]
  [4] __init__()
    @ MKL_jll C:\Users\monty\.julia\packages\MKL_jll\GxRJ5\src\wrappers\x86_64-w64-mingw32.jl:10
  [5] run_module_init(mod::Module, i::Int64)
    @ Base .\loading.jl:1128
  [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
    @ Base .\loading.jl:1116
  [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::String, depmods::Vector{Any})
    @ Base .\loading.jl:1061
  [8] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128)
    @ Base .\loading.jl:1575
  [9] _require(pkg::Base.PkgId, env::String)
    @ Base .\loading.jl:1932
 [10] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:1806
 [11] #invoke_in_world#3
    @ Base .\essentials.jl:921 [inlined]
 [12] invoke_in_world
    @ Base .\essentials.jl:918 [inlined]
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:1797
 [14] macro expansion
    @ Base .\loading.jl:1784 [inlined]
 [15] macro expansion
    @ Base .\lock.jl:267 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base .\loading.jl:1747
 [17] #invoke_in_world#3
    @ Base .\essentials.jl:921 [inlined]
 [18] invoke_in_world
    @ Base .\essentials.jl:918 [inlined]
 [19] require(into::Module, mod::Symbol)
    @ Base .\loading.jl:1740
 [20] top-level scope
    @ C:\Users\monty\.julia\packages\Preferences\TTEAN\src\Preferences.jl:46
 [21] include
    @ Base .\Base.jl:495 [inlined]
 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)olve
    @ Base .\loading.jl:2216
 [23] top-level scope
    @ stdin:3
during initialization of module MKL_jll
in expression starting at C:\Users\monty\.julia\packages\LinearSolve\Dqpre\src\LinearSolve.jl:1
in expression starting at stdin:3
  ✗ LinearSolve
  0 dependencies successfully precompiled in 7 seconds. 137 already precompiled.

ERROR: The following 1 direct dependency failed to precompile:

LinearSolve [7ed4a6bd-45f5-4d41-b270-4a48e9bafcae]

Failed to precompile LinearSolve [7ed4a6bd-45f5-4d41-b270-4a48e9bafcae] to "C:\\Users\\monty\\.julia\\compiled\\v1.10\\LinearSolve\\jl_8F9E.tmp".
ERROR: LoadError: InitError: could not load library "C:\Users\monty\.julia\artifacts\627190b3418f9b1cfbbf9b16afba530328670386\bin\mkl_core.2.dll"
The specified module could not be found.
Stacktrace:
  [1] dlopen(s::String, flags::UInt32; throw_error::Bool)
    @ Base.Libc.Libdl .\libdl.jl:117
  [2] dlopen(s::String, flags::UInt32)
    @ Base.Libc.Libdl .\libdl.jl:116
  [3] macro expansion
    @ C:\Users\monty\.julia\packages\JLLWrappers\pG9bm\src\products\library_generators.jl:63 [inlined]
  [4] __init__()
    @ MKL_jll C:\Users\monty\.julia\packages\MKL_jll\GxRJ5\src\wrappers\x86_64-w64-mingw32.jl:10
  [5] run_module_init(mod::Module, i::Int64)
    @ Base .\loading.jl:1128
  [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
    @ Base .\loading.jl:1116
  [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::String, depmods::Vector{Any})
    @ Base .\loading.jl:1061
  [8] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128)
    @ Base .\loading.jl:1575
  [9] _require(pkg::Base.PkgId, env::String)
    @ Base .\loading.jl:1932
 [10] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:1806
 [11] #invoke_in_world#3
    @ Base .\essentials.jl:921 [inlined]
 [12] invoke_in_world
    @ Base .\essentials.jl:918 [inlined]
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:1797
 [14] macro expansion
    @ Base .\loading.jl:1784 [inlined]
 [15] macro expansion
    @ Base .\lock.jl:267 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base .\loading.jl:1747
 [17] #invoke_in_world#3
    @ Base .\essentials.jl:921 [inlined]
 [18] invoke_in_world
    @ Base .\essentials.jl:918 [inlined]
 [19] require(into::Module, mod::Symbol)
    @ Base .\loading.jl:1740
 [20] top-level scope
    @ C:\Users\monty\.julia\packages\Preferences\TTEAN\src\Preferences.jl:46
 [21] include
    @ Base .\Base.jl:495 [inlined]
 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base .\loading.jl:2216
 [23] top-level scope
    @ stdin:3
during initialization of module MKL_jll
in expression starting at C:\Users\monty\.julia\packages\LinearSolve\Dqpre\src\LinearSolve.jl:1
in expression starting at stdin:
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types C:\Users\monty\.julia\juliaup\julia-1.10.0+0.x64.w64.mingw32\share\julia\stdlib\v1.10\Pkg\src\Types.jl:70
  [2] precompile(ctx::Pkg.Types.Context, pkgs::Vector{…}; internal_call::Bool, strict::Bool, warn_loaded::Bool, already_instantiated::Bool, timing::Bool, _from_loading::Bool, kwargs::@Kwargs{…})
    @ Pkg.API C:\Users\monty\.julia\juliaup\julia-1.10.0+0.x64.w64.mingw32\share\julia\stdlib\v1.10\Pkg\src\API.jl:1656
  [3] precompile(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.TTY, kwargs::@Kwargs{_from_loading::Bool})
    @ Pkg.API C:\Users\monty\.julia\juliaup\julia-1.10.0+0.x64.w64.mingw32\share\julia\stdlib\v1.10\Pkg\src\API.jl:159
  [4] precompile
    @ Pkg.API C:\Users\monty\.julia\juliaup\julia-1.10.0+0.x64.w64.mingw32\share\julia\stdlib\v1.10\Pkg\src\API.jl:147 [inlined]
  [5] #precompile#114
    @ Pkg.API C:\Users\monty\.julia\juliaup\julia-1.10.0+0.x64.w64.mingw32\share\julia\stdlib\v1.10\Pkg\src\API.jl:146 [inlined]
  [6] #invokelatest#2
    @ Base .\essentials.jl:889 [inlined]
  [7] invokelatest
    @ Base .\essentials.jl:884 [inlined]
  [8] _require(pkg::Base.PkgId, env::String)
    @ Base .\loading.jl:1957
  [9] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:1806
 [10] #invoke_in_world#3
    @ Base .\essentials.jl:921 [inlined]
 [11] invoke_in_world
    @ Base .\essentials.jl:918 [inlined]
 [12] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:1797
 [13] macro expansion
    @ Base .\loading.jl:1784 [inlined]
 [14] macro expansion
    @ Base .\lock.jl:267 [inlined]
 [15] __require(into::Module, mod::Symbol)
    @ Base .\loading.jl:1747
 [16] #invoke_in_world#3
    @ Base .\essentials.jl:921 [inlined]
 [17] invoke_in_world
    @ Base .\essentials.jl:918 [inlined]
 [18] require(into::Module, mod::Symbol)
    @ Base .\loading.jl:1740
 [19] eval
    @ .\boot.jl:385 [inlined]
 [20] eval
    @ .\Base.jl:88 [inlined]
 [21] repleval(m::Module, code::Expr, ::String)
    @ VSCodeServer c:\Users\monty\.vscode-insiders\extensions\julialang.language-julia-1.66.2\scripts\packages\VSCodeServer\src\repl.jl:229
 [22] (::VSCodeServer.var"#110#112"{Module, Expr, REPL.LineEditREPL, REPL.LineEdit.Prompt})()
    @ VSCodeServer c:\Users\monty\.vscode-insiders\extensions\julialang.language-julia-1.66.2\scripts\packages\VSCodeServer\src\repl.jl:192
 [23] with_logstate(f::Function, logstate::Any)
    @ Base.CoreLogging .\logging.jl:515
 [24] with_logger
    @ .\logging.jl:627 [inlined]
 [25] (::VSCodeServer.var"#109#111"{Module, Expr, REPL.LineEditREPL, REPL.LineEdit.Prompt})()
    @ VSCodeServer c:\Users\monty\.vscode-insiders\extensions\julialang.language-julia-1.66.2\scripts\packages\VSCodeServer\src\repl.jl:193
 [26] #invokelatest#2
    @ Base .\essentials.jl:887 [inlined]
 [27] invokelatest(::Any)
    @ Base .\essentials.jl:884
 [28] (::VSCodeServer.var"#62#63")()
    @ VSCodeServer c:\Users\monty\.vscode-insiders\extensions\julialang.language-julia-1.66.2\scripts\packages\VSCodeServer\src\eval.jl:34
Some type information was truncated. Use `show(err)` to see complete types.

here it is

@ChrisRackauckas
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Is this 32-bit Julia?

@ChrisRackauckas
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What happens if you ]add MKL_jll and ]build MKL_jll?

@montyvesselinov
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Precompiling LinearSolve
        Info Given LinearSolve was explicitly requested, output will be shown live
ERROR: LoadError: InitError: could not load library "C:\Users\monty\.julia\artifacts\627190b3418f9b1cfbbf9b16afba530328670386\bin\mkl_core.2.dll"
The specified module could not be found.
Stacktrace:
  [1] dlopen(s::String, flags::UInt32; throw_error::Bool)
    @ Base.Libc.Libdl .\libdl.jl:117
  [2] dlopen(s::String, flags::UInt32)
    @ Base.Libc.Libdl .\libdl.jl:116
  [3] macro expansion
    @ C:\Users\monty\.julia\packages\JLLWrappers\pG9bm\src\products\library_generators.jl:63 [inlined]
  [4] __init__()
    @ MKL_jll C:\Users\monty\.julia\packages\MKL_jll\GxRJ5\src\wrappers\x86_64-w64-mingw32.jl:10
  [5] run_module_init(mod::Module, i::Int64)
    @ Base .\loading.jl:1128
  [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
    @ Base .\loading.jl:1116
  [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::String, depmods::Vector{Any})
    @ Base .\loading.jl:1061
  [8] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128)
    @ Base .\loading.jl:1575
  [9] _require(pkg::Base.PkgId, env::String)
    @ Base .\loading.jl:1932
 [10] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:1806
 [11] #invoke_in_world#3
    @ Base .\essentials.jl:921 [inlined]
 [12] invoke_in_world
    @ Base .\essentials.jl:918 [inlined]
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:1797
 [14] macro expansion
    @ Base .\loading.jl:1784 [inlined]
 [15] macro expansion
    @ Base .\lock.jl:267 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base .\loading.jl:1747                                                                                                                                    
 [17] #invoke_in_world#3                                                                                                                                        
    @ Base .\essentials.jl:921 [inlined]
 [18] invoke_in_world
    @ Base .\essentials.jl:918 [inlined]
 [19] require(into::Module, mod::Symbol)
    @ Base .\loading.jl:1740
 [20] top-level scope
    @ C:\Users\monty\.julia\packages\Preferences\TTEAN\src\Preferences.jl:46
 [21] include
    @ Base .\Base.jl:495 [inlined]
 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base .\loading.jl:2216
 [23] top-level scope
    @ stdin:3
during initialization of module MKL_jll
in expression starting at C:\Users\monty\.julia\packages\LinearSolve\Dqpre\src\LinearSolve.jl:1
in expression starting at stdin:3
  ✗ LinearSolve
  0 dependencies successfully precompiled in 6 seconds. 137 already precompiled.

ERROR: The following 1 direct dependency failed to precompile:

LinearSolve [7ed4a6bd-45f5-4d41-b270-4a48e9bafcae]

Failed to precompile LinearSolve [7ed4a6bd-45f5-4d41-b270-4a48e9bafcae] to "C:\\Users\\monty\\.julia\\compiled\\v1.10\\LinearSolve\\jl_D7F.tmp".
ERROR: LoadError: InitError: could not load library "C:\Users\monty\.julia\artifacts\627190b3418f9b1cfbbf9b16afba530328670386\bin\mkl_core.2.dll"
The specified module could not be found.
Stacktrace:
  [1] dlopen(s::String, flags::UInt32; throw_error::Bool)
    @ Base.Libc.Libdl .\libdl.jl:117
  [2] dlopen(s::String, flags::UInt32)
    @ Base.Libc.Libdl .\libdl.jl:116
  [3] macro expansion
    @ C:\Users\monty\.julia\packages\JLLWrappers\pG9bm\src\products\library_generators.jl:63 [inlined]
  [4] __init__()
    @ MKL_jll C:\Users\monty\.julia\packages\MKL_jll\GxRJ5\src\wrappers\x86_64-w64-mingw32.jl:10
  [5] run_module_init(mod::Module, i::Int64)
    @ Base .\loading.jl:1128
  [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
    @ Base .\loading.jl:1116
  [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::String, depmods::Vector{Any})
    @ Base .\loading.jl:1061
  [8] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128)
    @ Base .\loading.jl:1575
  [9] _require(pkg::Base.PkgId, env::String)
    @ Base .\loading.jl:1932
 [10] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:1806
 [11] #invoke_in_world#3
    @ Base .\essentials.jl:921 [inlined]
 [12] invoke_in_world
    @ Base .\essentials.jl:918 [inlined]
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:1797
 [14] macro expansion
    @ Base .\loading.jl:1784 [inlined]
 [15] macro expansion
    @ Base .\lock.jl:267 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base .\loading.jl:1747
 [17] #invoke_in_world#3
    @ Base .\essentials.jl:921 [inlined]
 [18] invoke_in_world
    @ Base .\essentials.jl:918 [inlined]
 [19] require(into::Module, mod::Symbol)
    @ Base .\loading.jl:1740
 [20] top-level scope
    @ C:\Users\monty\.julia\packages\Preferences\TTEAN\src\Preferences.jl:46
 [21] include
    @ Base .\Base.jl:495 [inlined]
 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base .\loading.jl:2216
 [23] top-level scope
    @ stdin:3
during initialization of module MKL_jll
in expression starting at C:\Users\monty\.julia\packages\LinearSolve\Dqpre\src\LinearSolve.jl:1
in expression starting at stdin:
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types C:\Users\monty\.julia\juliaup\julia-1.10.0+0.x64.w64.mingw32\share\julia\stdlib\v1.10\Pkg\src\Types.jl:70
  [2] precompile(ctx::Pkg.Types.Context, pkgs::Vector{…}; internal_call::Bool, strict::Bool, warn_loaded::Bool, already_instantiated::Bool, timing::Bool, _from_loading::Bool, kwargs::@Kwargs{…})
    @ Pkg.API C:\Users\monty\.julia\juliaup\julia-1.10.0+0.x64.w64.mingw32\share\julia\stdlib\v1.10\Pkg\src\API.jl:1656
  [3] precompile(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.TTY, kwargs::@Kwargs{_from_loading::Bool})
    @ Pkg.API C:\Users\monty\.julia\juliaup\julia-1.10.0+0.x64.w64.mingw32\share\julia\stdlib\v1.10\Pkg\src\API.jl:159
  [4] precompile
    @ Pkg.API C:\Users\monty\.julia\juliaup\julia-1.10.0+0.x64.w64.mingw32\share\julia\stdlib\v1.10\Pkg\src\API.jl:147 [inlined]
  [5] #precompile#114
    @ Pkg.API C:\Users\monty\.julia\juliaup\julia-1.10.0+0.x64.w64.mingw32\share\julia\stdlib\v1.10\Pkg\src\API.jl:146 [inlined]
  [6] #invokelatest#2
    @ Base .\essentials.jl:889 [inlined]
  [7] invokelatest
    @ Base .\essentials.jl:884 [inlined]
  [8] _require(pkg::Base.PkgId, env::String)
    @ Base .\loading.jl:1957
  [9] __require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:1806
 [10] #invoke_in_world#3
    @ Base .\essentials.jl:921 [inlined]
 [11] invoke_in_world
    @ Base .\essentials.jl:918 [inlined]
 [12] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base .\loading.jl:1797
 [13] macro expansion
    @ Base .\loading.jl:1784 [inlined]
 [14] macro expansion
    @ Base .\lock.jl:267 [inlined]
 [15] __require(into::Module, mod::Symbol)
    @ Base .\loading.jl:1747
 [16] #invoke_in_world#3
    @ Base .\essentials.jl:921 [inlined]
 [17] invoke_in_world
    @ Base .\essentials.jl:918 [inlined]
 [18] require(into::Module, mod::Symbol)
    @ Base .\loading.jl:1740
 [19] eval
    @ .\boot.jl:385 [inlined]
 [20] eval
    @ .\Base.jl:88 [inlined]
 [21] repleval(m::Module, code::Expr, ::String)
    @ VSCodeServer c:\Users\monty\.vscode-insiders\extensions\julialang.language-julia-1.66.2\scripts\packages\VSCodeServer\src\repl.jl:229
 [22] (::VSCodeServer.var"#110#112"{Module, Expr, REPL.LineEditREPL, REPL.LineEdit.Prompt})()
    @ VSCodeServer c:\Users\monty\.vscode-insiders\extensions\julialang.language-julia-1.66.2\scripts\packages\VSCodeServer\src\repl.jl:192
 [23] with_logstate(f::Function, logstate::Any)
    @ Base.CoreLogging .\logging.jl:515
 [24] with_logger
    @ .\logging.jl:627 [inlined]
 [25] (::VSCodeServer.var"#109#111"{Module, Expr, REPL.LineEditREPL, REPL.LineEdit.Prompt})()
    @ VSCodeServer c:\Users\monty\.vscode-insiders\extensions\julialang.language-julia-1.66.2\scripts\packages\VSCodeServer\src\repl.jl:193
 [26] #invokelatest#2
    @ Base .\essentials.jl:887 [inlined]
 [27] invokelatest(::Any)
    @ Base .\essentials.jl:884
 [28] (::VSCodeServer.var"#62#63")()
    @ VSCodeServer c:\Users\monty\.vscode-insiders\extensions\julialang.language-julia-1.66.2\scripts\packages\VSCodeServer\src\eval.jl:34
Some type information was truncated. Use `show(err)` to see complete types.

@montyvesselinov
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Above is after ]add MKL_jll and ]build MKL_jll ...

Their execution did not produce any errors.

@giordano
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giordano commented Feb 2, 2024

@montyvesselinov just as a sanity check, do you have the file C:\Users\monty\.julia\artifacts\627190b3418f9b1cfbbf9b16afba530328670386\bin\mkl_core.2.dll on disk? But in general these error messages are extremely frustrating because they're very unclear and they come directly from your operating system, we can't get more information out of it than the next-to-nothing that it's telling us.

@montyvesselinov
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No. The file is missing.

@montyvesselinov
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I have been struggling with artifacts in the past and I know how frustrating is it. there should be a way to fix these problems. last time I had to rebuild everything.

@montyvesselinov
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it is solved now; the steps are:

  • delete the empty folder C:\Users\monty.julia\artifacts\627190b3418f9b1cfbbf9b16afba530328670386
  • ]rm MKL_jll
  • ]gc --all
  • ]add MKL_jll
  • ]build MKL_jll

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