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SciML · Sep 23, 2023 · abb41a6 · abb41a6
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diff --git a/dev/assets/Manifest.toml b/dev/assets/Manifest.toml
@@ -2,7 +2,7 @@
 
 julia_version = "1.9.3"
 manifest_format = "2.0"
-project_hash = "d25326d286a1ca80546379cc6d4fbcd71f72a0b4"
+project_hash = "45899570b143b2b68c41a9fe45073b71f50305e3"
 
 [[deps.ADTypes]]
 git-tree-sha1 = "5d2e21d7b0d8c22f67483ef95ebdc39c0e6b6003"
@@ -211,9 +211,9 @@ uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"
 
 [[deps.DiffEqBase]]
 deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"]
-git-tree-sha1 = "0d9982e8dee851d519145857e79a17ee33ede154"
+git-tree-sha1 = "0895fa2037f528b38c1eb77ded3e6952f2a2b93c"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
-version = "6.130.0"
+version = "6.130.1"
 
     [deps.DiffEqBase.extensions]
     DiffEqBaseDistributionsExt = "Distributions"
@@ -239,9 +239,9 @@ version = "6.130.0"
 
 [[deps.DiffEqCallbacks]]
 deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "Functors", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"]
-git-tree-sha1 = "42424e81924d4f463c6f8db8ce2978d51ba0aeaf"
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 uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def"
-version = "2.30.0"
+version = "2.31.0"
 
     [deps.DiffEqCallbacks.weakdeps]
     OrdinaryDiffEq = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
@@ -534,9 +534,9 @@ version = "1.0.36"
 
 [[deps.JumpProcesses]]
 deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "TreeViews", "UnPack"]
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 uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5"
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 weakdeps = ["FastBroadcast"]
 
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@@ -630,9 +630,9 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 
 [[deps.LinearSolve]]
 deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"]
-git-tree-sha1 = "dd70543d3c4fc712c14d67e2d35b90817e8bc37d"
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+version = "2.7.0"
 
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@@ -722,9 +722,9 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804"
 
 [[deps.ModelingToolkit]]
 deps = ["AbstractTrees", "ArrayInterface", "Combinatorics", "Compat", "ConstructionBase", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "DiffRules", "Distributed", "Distributions", "DocStringExtensions", "DomainSets", "ForwardDiff", "FunctionWrappersWrappers", "Graphs", "IfElse", "InteractiveUtils", "JuliaFormatter", "JumpProcesses", "LabelledArrays", "Latexify", "Libdl", "LinearAlgebra", "MLStyle", "MacroTools", "NaNMath", "OrdinaryDiffEq", "PrecompileTools", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLBase", "Serialization", "Setfield", "SimpleNonlinearSolve", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "SymbolicUtils", "Symbolics", "URIs", "UnPack", "Unitful"]
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+git-tree-sha1 = "137c684ae68e58c6cdadee112855d79e2f613ff9"
 uuid = "961ee093-0014-501f-94e3-6117800e7a78"
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     [deps.ModelingToolkit.extensions]
     MTKDeepDiffsExt = "DeepDiffs"
@@ -777,9 +777,9 @@ version = "1.2.0"
 
 [[deps.NonlinearSolve]]
 deps = ["ArrayInterface", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"]
-git-tree-sha1 = "ee53089df81a6bdf3c06c17cf674e90931b10a73"
+git-tree-sha1 = "e10debcea868cd6e51249e8eeaf191c25f68a640"
 uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec"
-version = "1.10.0"
+version = "1.10.1"
 
 [[deps.OffsetArrays]]
 deps = ["Adapt"]
@@ -810,9 +810,9 @@ version = "1.6.2"
 
 [[deps.OrdinaryDiffEq]]
 deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"]
-git-tree-sha1 = "ba3ed480f991b846cf9a8118d3370d9752e7166d"
+git-tree-sha1 = "ede6c2334cb30bc83a450b282c10d0ae82fc122e"
 uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
-version = "6.55.0"
+version = "6.56.0"
 
 [[deps.PDMats]]
 deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
@@ -821,9 +821,9 @@ uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
 version = "0.11.18"
 
 [[deps.PackageExtensionCompat]]
-git-tree-sha1 = "f9b1e033c2b1205cf30fd119f4e50881316c1923"
+git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518"
 uuid = "65ce6f38-6b18-4e1d-a461-8949797d7930"
-version = "1.0.1"
+version = "1.0.2"
 weakdeps = ["Requires", "TOML"]
 
 [[deps.Parameters]]
@@ -1005,7 +1005,7 @@ version = "0.6.39"
 deps = ["ADTypes", "ArrayInterface", "ChainRulesCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces", "ZygoteRules"]
 path = "/home/runner/work/SciMLBase.jl/SciMLBase.jl"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "1.99.0"
+version = "2.0.1"
 
     [deps.SciMLBase.extensions]
     ZygoteExt = "Zygote"
@@ -1015,9 +1015,9 @@ version = "1.99.0"
 
 [[deps.SciMLNLSolve]]
 deps = ["DiffEqBase", "LineSearches", "NLsolve", "Reexport", "SciMLBase"]
-git-tree-sha1 = "9dfc8e9e3d58c0c74f1a821c762b5349da13eccf"
+git-tree-sha1 = "765b788339abd7d983618c09cfc0192e2b6b15fd"
 uuid = "e9a6253c-8580-4d32-9898-8661bb511710"
-version = "0.1.8"
+version = "0.1.9"
 
 [[deps.SciMLOperators]]
 deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"]
@@ -1040,9 +1040,9 @@ uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383"
 
 [[deps.SimpleNonlinearSolve]]
 deps = ["ArrayInterface", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "PackageExtensionCompat", "PrecompileTools", "Reexport", "SciMLBase", "StaticArraysCore"]
-git-tree-sha1 = "20aa9831d654bab67ed561e78917047143ecb9bf"
+git-tree-sha1 = "4d53b83af904049c493daaf2a225bcae994a3c59"
 uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7"
-version = "0.1.19"
+version = "0.1.20"
 
     [deps.SimpleNonlinearSolve.extensions]
     SimpleNonlinearSolveNNlibExt = "NNlib"
@@ -1198,15 +1198,15 @@ version = "0.2.2"
 
 [[deps.SymbolicUtils]]
 deps = ["AbstractTrees", "Bijections", "ChainRulesCore", "Combinatorics", "ConstructionBase", "DataStructures", "DocStringExtensions", "DynamicPolynomials", "IfElse", "LabelledArrays", "LinearAlgebra", "MultivariatePolynomials", "NaNMath", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "TimerOutputs", "Unityper"]
-git-tree-sha1 = "dbb5d0cb3aa5207e887ab12e4549c5313d0f4f02"
+git-tree-sha1 = "2f3fa844bcd33e40d8c29de5ee8dded7a0a70422"
 uuid = "d1185830-fcd6-423d-90d6-eec64667417b"
-version = "1.3.0"
+version = "1.4.0"
 
 [[deps.Symbolics]]
-deps = ["ArrayInterface", "Bijections", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "Groebner", "IfElse", "LaTeXStrings", "LambertW", "Latexify", "Libdl", "LinearAlgebra", "MacroTools", "Markdown", "NaNMath", "RecipesBase", "Reexport", "Requires", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicUtils", "TreeViews"]
-git-tree-sha1 = "ac7f8825d029b568f82dbf2cb49da9cebcadaffb"
+deps = ["ArrayInterface", "Bijections", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "DynamicPolynomials", "Groebner", "IfElse", "LaTeXStrings", "LambertW", "Latexify", "Libdl", "LinearAlgebra", "MacroTools", "Markdown", "NaNMath", "PrecompileTools", "RecipesBase", "Reexport", "Requires", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicUtils", "TreeViews"]
+git-tree-sha1 = "d8b3a50cf6ccb19a090c0bb6d89fd4f1b576fcfb"
 uuid = "0c5d862f-8b57-4792-8d23-62f2024744c7"
-version = "5.5.3"
+version = "5.6.0"
 
     [deps.Symbolics.extensions]
     SymbolicsSymPyExt = "SymPy"

diff --git a/dev/assets/Project.toml b/dev/assets/Project.toml
@@ -1,9 +1,9 @@
 [deps]
-SciMLBase = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
 Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
 ModelingToolkit = "961ee093-0014-501f-94e3-6117800e7a78"
+SciMLBase = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
 
 [compat]
 Documenter = "0.27"
 ModelingToolkit = "8.35"
-SciMLBase = "1.74"
+SciMLBase = "1.74, 2"
diff --git a/dev/fundamentals/FAQ/index.html b/dev/fundamentals/FAQ/index.html
diff --git a/dev/index.html b/dev/index.html
diff --git a/dev/interfaces/Algorithms/index.html b/dev/interfaces/Algorithms/index.html
diff --git a/dev/interfaces/Common_Keywords/index.html b/dev/interfaces/Common_Keywords/index.html
diff --git a/dev/interfaces/Differentiation/index.html b/dev/interfaces/Differentiation/index.html
@@ -29,4 +29,4 @@
 
 function _concrete_solve_forward(args...; kwargs...)
   error(&quot;No sensitivity rules exist. Check that you added `using DiffEqSensitivity`&quot;)
-end</code></pre><p>The sensitivity mechanism is kept in a separate package because of the high dependency and load time cost introduced by the automatic differentiation libraries. Different choices of automatic differentiation are then selected by the <code>sensealg</code> keyword argument in <code>solve</code>, which is made into a positional argument in the <code>_solve_adjoint</code> and other functions in order to allow dispatch.</p><h2 id="SensitivityADPassThrough"><a class="docs-heading-anchor" href="#SensitivityADPassThrough">SensitivityADPassThrough</a><a id="SensitivityADPassThrough-1"></a><a class="docs-heading-anchor-permalink" href="#SensitivityADPassThrough" title="Permalink"></a></h2><p>The special sensitivity algorithm <code>SensitivityADPassThrough</code> is used to ignore the internal sensitivity dispatches and instead do automatic differentiation directly through the solver. Generally this <code>sensealg</code> is only used internally.</p><h2 id="Note-about-ForwardDiff"><a class="docs-heading-anchor" href="#Note-about-ForwardDiff">Note about ForwardDiff</a><a id="Note-about-ForwardDiff-1"></a><a class="docs-heading-anchor-permalink" href="#Note-about-ForwardDiff" title="Permalink"></a></h2><p>ForwardDiff does not use ChainRules.jl and thus it completely ignores the special handling.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../Common_Keywords/">« Common Keyword Arguments</a><a class="docs-footer-nextpage" href="../PDE/">The PDE Definition Interface »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 0.27.25 on <span class="colophon-date" title="Friday 22 September 2023 02:23">Friday 22 September 2023</span>. Using Julia version 1.9.3.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
+end</code></pre><p>The sensitivity mechanism is kept in a separate package because of the high dependency and load time cost introduced by the automatic differentiation libraries. Different choices of automatic differentiation are then selected by the <code>sensealg</code> keyword argument in <code>solve</code>, which is made into a positional argument in the <code>_solve_adjoint</code> and other functions in order to allow dispatch.</p><h2 id="SensitivityADPassThrough"><a class="docs-heading-anchor" href="#SensitivityADPassThrough">SensitivityADPassThrough</a><a id="SensitivityADPassThrough-1"></a><a class="docs-heading-anchor-permalink" href="#SensitivityADPassThrough" title="Permalink"></a></h2><p>The special sensitivity algorithm <code>SensitivityADPassThrough</code> is used to ignore the internal sensitivity dispatches and instead do automatic differentiation directly through the solver. Generally this <code>sensealg</code> is only used internally.</p><h2 id="Note-about-ForwardDiff"><a class="docs-heading-anchor" href="#Note-about-ForwardDiff">Note about ForwardDiff</a><a id="Note-about-ForwardDiff-1"></a><a class="docs-heading-anchor-permalink" href="#Note-about-ForwardDiff" title="Permalink"></a></h2><p>ForwardDiff does not use ChainRules.jl and thus it completely ignores the special handling.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../Common_Keywords/">« Common Keyword Arguments</a><a class="docs-footer-nextpage" href="../PDE/">The PDE Definition Interface »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 0.27.25 on <span class="colophon-date" title="Saturday 23 September 2023 01:33">Saturday 23 September 2023</span>. Using Julia version 1.9.3.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>