build based on 5d0d7e0

dev/.documenter-siteinfo.json

@@ -1 +1 @@
-{"documenter":{"julia_version":"1.9.3","generation_timestamp":"2023-10-06T07:37:45","documenter_version":"1.1.0"}}
+{"documenter":{"julia_version":"1.9.3","generation_timestamp":"2023-10-06T22:39:15","documenter_version":"1.1.0"}}

dev/assets/Manifest.toml

@@ -211,9 +211,9 @@ uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"
 
 [[deps.DiffEqBase]]
 deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"]
-git-tree-sha1 = "96e97e5f6794c1c0d4309d64eaafacb80485da1d"
+git-tree-sha1 = "766ab4574433d22ff75ab28e9081114e73cef5d5"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
-version = "6.131.0"
+version = "6.132.0"
 
     [deps.DiffEqBase.extensions]
     DiffEqBaseDistributionsExt = "Distributions"
@@ -654,9 +654,9 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 
 [[deps.LinearSolve]]
 deps = ["ArrayInterface", "ConcreteStructs", "DocStringExtensions", "EnumX", "EnzymeCore", "FastLapackInterface", "GPUArraysCore", "InteractiveUtils", "KLU", "Krylov", "Libdl", "LinearAlgebra", "MKL_jll", "PrecompileTools", "Preferences", "RecursiveFactorization", "Reexport", "Requires", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"]
-git-tree-sha1 = "279cce40bcc891ce03f37908629d5f0399f79182"
+git-tree-sha1 = "435ab14ca589757a0feae6e3e347bc37addda42d"
 uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae"
-version = "2.9.1"
+version = "2.9.2"
 
     [deps.LinearSolve.extensions]
     LinearSolveBlockDiagonalsExt = "BlockDiagonals"
@@ -813,9 +813,9 @@ version = "1.2.0"
 
 [[deps.NonlinearSolve]]
 deps = ["ADTypes", "ArrayInterface", "ConcreteStructs", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LineSearches", "LinearAlgebra", "LinearSolve", "PrecompileTools", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"]
-git-tree-sha1 = "7032be911404fe667e2a7ccd464ba5f2532797f2"
+git-tree-sha1 = "445a7ba86794e1f8ee9da3b3b7becf284e2625fd"
 uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec"
-version = "2.0.1"
+version = "2.1.0"
 
 [[deps.OffsetArrays]]
 deps = ["Adapt"]
@@ -846,15 +846,15 @@ version = "1.6.2"
 
 [[deps.OrdinaryDiffEq]]
 deps = ["ADTypes", "Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "InteractiveUtils", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SciMLOperators", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"]
-git-tree-sha1 = "c7b30c0a9979292873c23e2f6a8842cd662107fa"
+git-tree-sha1 = "def999a7447854f0e9ca9fdda235e04a65916b76"
 uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed"
-version = "6.57.1"
+version = "6.58.0"
 
 [[deps.PDMats]]
 deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
-git-tree-sha1 = "528664265c9c36b3ecdb6d721d47aaab52ddf267"
+git-tree-sha1 = "fcf8fd477bd7f33cb8dbb1243653fb0d415c256c"
 uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
-version = "0.11.24"
+version = "0.11.25"
 
 [[deps.PackageExtensionCompat]]
 git-tree-sha1 = "fb28e33b8a95c4cee25ce296c817d89cc2e53518"
@@ -1047,7 +1047,7 @@ version = "0.6.39"
 deps = ["ADTypes", "ArrayInterface", "ChainRulesCore", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FillArrays", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces", "ZygoteRules"]
 path = "/home/runner/work/SciMLBase.jl/SciMLBase.jl"
 uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
-version = "2.1.0"
+version = "2.2.0"
 
     [deps.SciMLBase.extensions]
     PyCallExt = "PyCall"

dev/interfaces/Differentiation/index.html

@@ -25,4 +25,4 @@
 
 function _concrete_solve_forward(args...; kwargs...)
   error("No sensitivity rules exist. Check that you added `using DiffEqSensitivity`")
-end</code></pre><p>The sensitivity mechanism is kept in a separate package because of the high dependency and load time cost introduced by the automatic differentiation libraries. Different choices of automatic differentiation are then selected by the <code>sensealg</code> keyword argument in <code>solve</code>, which is made into a positional argument in the <code>_solve_adjoint</code> and other functions in order to allow dispatch.</p><h2 id="SensitivityADPassThrough"><a class="docs-heading-anchor" href="#SensitivityADPassThrough">SensitivityADPassThrough</a><a id="SensitivityADPassThrough-1"></a><a class="docs-heading-anchor-permalink" href="#SensitivityADPassThrough" title="Permalink"></a></h2><p>The special sensitivity algorithm <code>SensitivityADPassThrough</code> is used to ignore the internal sensitivity dispatches and instead do automatic differentiation directly through the solver. Generally this <code>sensealg</code> is only used internally.</p><h2 id="Note-about-ForwardDiff"><a class="docs-heading-anchor" href="#Note-about-ForwardDiff">Note about ForwardDiff</a><a id="Note-about-ForwardDiff-1"></a><a class="docs-heading-anchor-permalink" href="#Note-about-ForwardDiff" title="Permalink"></a></h2><p>ForwardDiff does not use ChainRules.jl and thus it completely ignores the special handling.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../Common_Keywords/">« Common Keyword Arguments</a><a class="docs-footer-nextpage" href="../PDE/">The PDE Definition Interface »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="auto">Automatic (OS)</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.1.0 on <span class="colophon-date" title="Friday 6 October 2023 07:37">Friday 6 October 2023</span>. Using Julia version 1.9.3.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
+end</code></pre><p>The sensitivity mechanism is kept in a separate package because of the high dependency and load time cost introduced by the automatic differentiation libraries. Different choices of automatic differentiation are then selected by the <code>sensealg</code> keyword argument in <code>solve</code>, which is made into a positional argument in the <code>_solve_adjoint</code> and other functions in order to allow dispatch.</p><h2 id="SensitivityADPassThrough"><a class="docs-heading-anchor" href="#SensitivityADPassThrough">SensitivityADPassThrough</a><a id="SensitivityADPassThrough-1"></a><a class="docs-heading-anchor-permalink" href="#SensitivityADPassThrough" title="Permalink"></a></h2><p>The special sensitivity algorithm <code>SensitivityADPassThrough</code> is used to ignore the internal sensitivity dispatches and instead do automatic differentiation directly through the solver. Generally this <code>sensealg</code> is only used internally.</p><h2 id="Note-about-ForwardDiff"><a class="docs-heading-anchor" href="#Note-about-ForwardDiff">Note about ForwardDiff</a><a id="Note-about-ForwardDiff-1"></a><a class="docs-heading-anchor-permalink" href="#Note-about-ForwardDiff" title="Permalink"></a></h2><p>ForwardDiff does not use ChainRules.jl and thus it completely ignores the special handling.</p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../Common_Keywords/">« Common Keyword Arguments</a><a class="docs-footer-nextpage" href="../PDE/">The PDE Definition Interface »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="auto">Automatic (OS)</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.1.0 on <span class="colophon-date" title="Friday 6 October 2023 22:39">Friday 6 October 2023</span>. Using Julia version 1.9.3.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>