fixed requirement.txt file and split runners scripts

ScilifelabDataCentre · Oct 15, 2024 · 1359b38 · 1359b38
1 parent 599a496
commit 1359b38
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Showing 6 changed files with 6 additions and 13 deletions.
diff --git a/runner_daily.sh → freya_runner_daily.sh b/runner_daily.sh → freya_runner_daily.sh
@@ -1,7 +1,5 @@
 export CODE_PATH=/code
 
-# Feed SciLifeLab figshare data to Slack
-python "$CODE_PATH"/slack_figshare.py
-
 # Update EBI index file
 PYTHONPATH="$CODE_PATH"/pathogens-portal-scripts/EBI_indexing python "$CODE_PATH"/pathogens-portal-scripts/EBI_indexing/update_index_json.py
+
diff --git a/runner_every10mins.sh → freya_runner_every10mins.sh b/runner_every10mins.sh → freya_runner_every10mins.sh
diff --git a/runner_weekly.sh → freya_runner_weekly.sh b/runner_weekly.sh → freya_runner_weekly.sh
diff --git a/requirements.txt b/requirements.txt
@@ -1,13 +1,4 @@
 # DC-DYNAMIC DEPENDENCIES
 beautifulsoup4==4.11.1
 requests==2.32.3
-lxml==4.9.1
-
-# VISUALISATIONS DEPENDENCIES
-matplotlib==3.9.1.post1
-numpy==2.0.1
-openpyxl==3.1.5
-pandas==2.2.2
-pillow==10.4.0
-plotly==5.23.0
-wordcloud==1.9.3
+lxml==4.9.1
diff --git a/slack_runner_daily.sh b/slack_runner_daily.sh
@@ -0,0 +1,4 @@
+export CODE_PATH=/code
+
+# Feed SciLifeLab figshare data to Slack
+python "$CODE_PATH"/slack_figshare.py
diff --git a/runner_hourly.sh → slack_runner_hourly.sh b/runner_hourly.sh → slack_runner_hourly.sh