CITATION.cff

cff-version: 1.2.0
title: The Swedish Reference Genome Portal
message: "If you use or reuse this software, please cite it using the following metadata."
type: software
authors:
  - family-names: Lantz
    given-names: Henrik
  - family-names: Brink
    given-names: Daniel P.
    orcid: "https://orcid.org/0000-0003-4041-0250"
  - family-names: Crean
    given-names: Rory
  - family-names: Ågren
    given-names: Quentin
  - family-names: Fuentes-Pardo
    given-names: Angela P. 
    orcid: "https://orcid.org/0000-0002-5734-9030"
  - family-names: Kochari
    given-names: Arnold
    orcid: "https://orcid.org/0000-0003-1373-5121"
  - family-names: Kultima
    given-names: Hanna
    orcid: "https://orcid.org/0000-0001-7724-2567"
  - family-names: Persson
    given-names: Bengt
  - family-names: Rung
    given-names: Johan
    orcid: "https://orcid.org/0000-0001-5875-8429"
repository-code: "https://github.com/ScilifelabDataCentre/genome-portal"
url: "https://genomes.scilifelab.se"
license: MIT
identifiers:
  - description: "This is the collection of archived snapshots of all versions of the Swedish Reference Genome Portal"
    type: doi
    value: 10.5281/zenodo.14049736
references:
  - authors:
      - family-names: Diesh
        given-names: Colin
      - family-names: Stevens
        given-names: Garrett J.
      - family-names: Xie
        given-names: Peter
      - family-names: De Jesus Martinez
        given-names: Teresa
      - family-names: Hershberg
        given-names: Elliot A.
      - family-names: Leung
        given-names: Angel
      - family-names: Guo
        given-names: Emma
      - family-names: Dider
        given-names: Shihab
      - family-names: Zhang
        given-names: Junjun
      - family-names: Bridge
        given-names: Caroline
      - family-names: Hogue
        given-names: Gregory
      - family-names: Duncan
        given-names: Andrew
      - family-names: Morgan
        given-names: Matthew
      - family-names: Flores
        given-names: Tia
      - family-names: Bimber
        given-names: Benjamin N.
      - family-names: Haw
        given-names: Robin
      - family-names: Cain
        given-names: Scott
      - family-names: Buels
        given-names: Robert M.
      - family-names: Stein
        given-names: Lincoln D.
      - family-names: Holmes
        given-names: Ian H. 
    doi: 10.1186/s13059-023-02914-z
    issue: 1
    journal: Genome Biology
    scope: "Please cite this paper for referencing JBrowse 2, the genome browser software utilized on the Swedish Reference Genome Portal."
    title: "JBrowse 2: a modular genome browser with views of synteny and structural variation"
    type: article
    volume: 24
    year: 2023