From d9e9465909fb57fe825a7bf86cad9539be958e78 Mon Sep 17 00:00:00 2001 From: Abdullah Aziz Date: Tue, 14 May 2024 11:48:02 +0200 Subject: [PATCH 1/6] Modify historic_stockholm.md file to change visualisation from Vega to Plotly --- .../historic_stockholm.md | 21 ++++++++----------- .../historic_stockholm.md | 21 +++++++------------ 2 files changed, 17 insertions(+), 25 deletions(-) diff --git a/content/english/dashboards/wastewater/covid_quantification/historic_stockholm.md b/content/english/dashboards/wastewater/covid_quantification/historic_stockholm.md index 56d1d833d..ac23fe1d0 100644 --- a/content/english/dashboards/wastewater/covid_quantification/historic_stockholm.md +++ b/content/english/dashboards/wastewater/covid_quantification/historic_stockholm.md @@ -1,5 +1,6 @@ --- title: "Historic data for Stockholm" +plotly: true aliases: - /data_types/environment/wastewater/historic_stockholm/ - /dashboards/wastewater/historic_stockholm/ @@ -18,20 +19,16 @@ See also [the page of the research group where summaries of data and preliminary **How to cite:** Cetecioglu Z G, Williams, C, Khatami, K, Atasoy, M, Nandy, P, Jafferali, M H, Birgersson, M. SARS-CoV-2 Wastewater Data from Stockholm, Sweden. [https://doi.org/10.17044/scilifelab.14315483](https://doi.org/10.17044/scilifelab.14315483) (2021). -
- Scroll the plot sideways to view all data. -
+**Code used to produce plot:** [Script to produce plot](https://github.com/ScilifelabDataCentre/pathogens-portal-visualisations/blob/main/wastewater/wastewater_data_stockholm.py). -
-
+
+ Rotating your phone may improve graph layout
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*NB: All samples until week 21 of 2020 were received by the lab in week 21. Between weeks 21 and 33 of 2020 samples were analyzed biweekly. After week 33 of 2020, samples were analysed weekly.
- -
**NB: Measurements were taken fortnightly, rather than weekly, between weeks 24 and 32 of 2021.
+
+
{{< plotly json="https://blobserver.dc.scilifelab.se/blob/wastewater_data_stockholm.json" height="550px">}}
+
- - - +
NB: All samples until week 21 of 2020 were received by the lab in week 21. Between weeks 21 and 33 of 2020 samples were analyzed biweekly. After week 33 of 2020, samples were analysed weekly.
- +
NB: Measurements were taken fortnightly, rather than weekly, between weeks 24 and 32 of 2021.
diff --git a/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md b/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md index 236cd98f9..98055338c 100644 --- a/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md +++ b/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md @@ -1,5 +1,6 @@ --- title: "Historiska data för Stockholm" +plotly: true aliases: - /sv/data_types/environment/wastewater/historic_stockholm/ - /sv/dashboards/wastewater/historic_stockholm/ @@ -16,25 +17,19 @@ Efter koncentrering, filtrering och beredning analyserades proverna med RT-qPCR- **Referera till detta dataset:** Cetecioglu Z G, Williams, C, Khatami, K, Atasoy, M, Nandy, P, Jafferali, M H, Birgersson, M. SARS-CoV-2 Wastewater Data from Stockholm, Sweden. [https://doi.org/10.17044/scilifelab.14315483](https://doi.org/10.17044/scilifelab.14315483) (2021). -
+**Källskod som används för att skapa grafen:** [Källskod](https://github.com/ScilifelabDataCentre/pathogens-portal-visualisations/blob/main/wastewater/wastewater_data_stockholm.py). + +
Skrolla grafen horisontellt för att se alla data.
-
-
+
+
{{< plotly json="https://blobserver.dc.scilifelab.se/blob/wastewater_data_stockholm.json" height="550px">}}
-
*NB: Alla prover innan vecka 21 har kommit till labbet vecka 21. Mellan vecka 21 och 33 har prover analyserats varannan vecka. Efter vecka 33 har proverna analyserats varje vecka.
+
NB: Alla prover innan vecka 21 har kommit till labbet vecka 21. Mellan vecka 21 och 33 har prover analyserats varannan vecka. Efter vecka 33 har proverna analyserats varje vecka.
-
**NB: Avloppsvattenmätningarna har utförts varannan vecka, inte veckovis, mellan vecka 24 och vecka 32 2021.
+
NB: Avloppsvattenmätningarna har utförts varannan vecka, inte veckovis, mellan vecka 24 och vecka 32 2021.
-
Publikationer:
-Benchmarking virus concentration methods for quantification of SARS-CoV-2 in raw wastewater.
- Jafferali MH, Khatami K, Atasoy M, Birgersson M, Williams C, Cetecioglu Z.
- Science of The Total Environment 755. DOI: 10.1016/j.scitotenv.2020.142939 - - - - From c962e0e3db56c58731a2061feb890b8f406cdb7d Mon Sep 17 00:00:00 2001 From: LianeHughes <68756672+LianeHughes@users.noreply.github.com> Date: Wed, 15 May 2024 02:04:55 +0200 Subject: [PATCH 2/6] updates to text --- .../historic_stockholm.md | 22 ++++++++----------- .../historic_stockholm.md | 19 ++++++---------- 2 files changed, 16 insertions(+), 25 deletions(-) diff --git a/content/english/dashboards/wastewater/covid_quantification/historic_stockholm.md b/content/english/dashboards/wastewater/covid_quantification/historic_stockholm.md index ac23fe1d0..01a8e7c15 100644 --- a/content/english/dashboards/wastewater/covid_quantification/historic_stockholm.md +++ b/content/english/dashboards/wastewater/covid_quantification/historic_stockholm.md @@ -2,24 +2,20 @@ title: "Historic data for Stockholm" plotly: true aliases: - - /data_types/environment/wastewater/historic_stockholm/ - - /dashboards/wastewater/historic_stockholm/ + - /data_types/environment/wastewater/historic_stockholm/ + - /dashboards/wastewater/historic_stockholm/ --- -This page displays data on the amount of SARS-CoV-2 in Stockholm between April 2020 and August 2021 calculated as Gene copy number/week (raw wastewater) with bovine + PMMoV factor. From September 2021 onwards, the method was changed. Please [see this page for the most recent data](./). +This page displays data on the amount of SARS-CoV-2 in the wastewater in Stockholm between April 2020 and August 2021. The amount of SARS-CoV-2 in wastewater was calculated as the number of gene copies per week (raw wastewater) with bovine + PMMoV factor. From September 2021 onwards, the method was changed. Please [see this page for the most recent data](/dashboards/wastewater/covid_quantification/covid_quant_kth/). -This project, led by associate professor Zeynep Cetecioglu Gurol and colleagues (KTH Royal Institute of Technology; ), is a collaboration between the [SciLifeLab COVID-19 National Research Program](https://www.scilifelab.se/covid-19) and the [SEED](https://www.kth.se/en/seed) and [Chemical Engineering](https://www.kth.se/ket/chemical-engineering-1.784196) departments at KTH, in close collaboration with Stockholm Vatten och Avfall and the Käppala Association. The sampling of wastewater, started in mid-April 2020, from Bromma, Henriksdal, and Käppala wastewater treatment plants (WWTP). These treatment plants receive wastewater from a population of approximately 360,000; 860,000 and 500,000, respectively. Please consult [this map for the exact catchment area of the wastewater collection channels in Käppala](/wastewater/map_Kappala.pdf) and [this map for the exact catchment area of the wastewater collection channels in Bromma and Henriksdal](/wastewater/map_Bromma_Henriksdal.pdf). +This project was led by associate professor Zeynep Cetecioglu Gurol and colleagues (KTH Royal Institute of Technology: ). The project was a collaboration between the [SciLifeLab COVID-19 National Research Program](https://www.scilifelab.se/covid-19), the [Sustainable Development, Environmental Science and Engineering (SEED)](https://www.kth.se/en/seed) and [Chemical Engineering](https://www.kth.se/ket/chemical-engineering-1.784196) departments at the KTH Royal Institute of Technology (KTH), as well as Stockholm Vatten och Avfall and the Käppala Association. The sampling of wastewater began in mid-April 2020, from the Bromma, Henriksdal, and Käppala wastewater treatment plants (WWTP). These treatment plants receive wastewater from a population of approximately 360,000, 860,000, and 500,000 people, respectively. Please see the catchment maps for [Käppala](/wastewater/map_Kappala.pdf) and [Bromma and Henriksdal](/wastewater/map_Bromma_Henriksdal.pdf) to understand where the wastewater originated from in each case. -After concentration, filtering, and preparation, the samples are analyzed using qPCR technique for SARS CoV-2 RNA. Primers of the nucleocapsid (N) gene were used to detect the SARS-COV-2 gene (previously used and verified by [Medema and colleagues (2020)](https://doi.org/10.1016/j.scitotenv.2020.142939)). In some cases, the raw wastewater has been frozen at –20 degrees, and concentrated wastewater or purified RNA have been stored at -80 C before the next analysis step was carried out. The concentration method used by prof. Zeynep Cetecioglu Gurol and her colleagues is based on their published study ([Jafferali and colleagues, 2021](https://doi.org/10.1016/j.scitotenv.2020.142939)) comparing four different concentration methods. The study concluded that the double ultrafiltration method adapted by KTH has a significantly higher efficiency compared to single filtration and adsorption methods. For detailed information about the concentration method, see the publication. +After concentration, filtering, and preparation, the samples are analysed using qPCR to test for SARS-CoV-2 RNA. Primers of the nucleocapsid (N) gene (previously used and verified by [Medema _et al._ (2020)](https://doi.org/10.1016/j.scitotenv.2020.142939)) were used to detect SARS-COV-2. In some cases, samples of raw wastewater were frozen at –20oC, and concentrated wastewater or purified RNA were stored at -80oC before the next analysis step was carried out. The concentration method used by prof. Gurol and colleagues was based on their published study ([Jafferali _et al._, 2021](https://doi.org/10.1016/j.scitotenv.2020.142939)), in which they compared four different concentration methods. The study concluded that the double ultrafiltration method adapted by KTH was significantly more efficient than single filtration and adsorption methods. Please see [Jafferali _et al._ (2021)](https://doi.org/10.1016/j.scitotenv.2020.142939) for more information on the methods. More information about [data summaries and preliminary conclusions are also available](https://www.kth.se/water/research/covid-1.979048). -See also [the page of the research group where summaries of data and preliminary conclusions are presented](https://www.kth.se/water/research/covid-1.979048). - -**Download the data:** [Gene copy number/week (raw wastewater) with bovine + PMMoV factor; Excel file.](https://blobserver.dc.scilifelab.se/blob/wastewater_data_Stockholm.xlsx) Numbers for Stockholm overall and divided by Inlet Henriksdal, Sickla, Hässelby, Järva, Riksby, and Käppala are available. Results are available (partially) starting from week 16 of 2020 and until week 34 of 2021. +**Download the data:** [Gene copy number/week (raw wastewater) with bovine + PMMoV factor; Excel file.](https://blobserver.dc.scilifelab.se/blob/wastewater_data_Stockholm.xlsx). The numbers for Stockholm overall, and for the Henriksdal, Sickla, Hässelby, Järva, Riksby, and Käppala inlets are provided. At least partial data are available between week 16 of 2020 and week 34 of 2021. **How to cite:** -Cetecioglu Z G, Williams, C, Khatami, K, Atasoy, M, Nandy, P, Jafferali, M H, Birgersson, M. SARS-CoV-2 Wastewater Data from Stockholm, Sweden. [https://doi.org/10.17044/scilifelab.14315483](https://doi.org/10.17044/scilifelab.14315483) (2021). - -**Code used to produce plot:** [Script to produce plot](https://github.com/ScilifelabDataCentre/pathogens-portal-visualisations/blob/main/wastewater/wastewater_data_stockholm.py). +Cetecioglu, Z. G., Williams, C., Khatami, K., Atasoy, M., Nandy, P., Jafferali, M. H., Birgersson, M. (2021). SARS-CoV-2 Wastewater Data from Stockholm, Sweden. [https://doi.org/10.17044/scilifelab.14315483](https://doi.org/10.17044/scilifelab.14315483).
Rotating your phone may improve graph layout @@ -29,6 +25,6 @@ Cetecioglu Z G, Williams, C, Khatami, K, Atasoy, M, Nandy, P, Jafferali, M H, Bi
{{< plotly json="https://blobserver.dc.scilifelab.se/blob/wastewater_data_stockholm.json" height="550px">}}
-
NB: All samples until week 21 of 2020 were received by the lab in week 21. Between weeks 21 and 33 of 2020 samples were analyzed biweekly. After week 33 of 2020, samples were analysed weekly.
+
All samples up until week 21 of 2020 were received by the lab in week 21. Between weeks 21 and 33 of 2020, samples were analysed biweekly. After week 33 of 2020, samples were typically analysed weekly, although measurements were taken fortnightly, rather than weekly, between weeks 24 and 32 of 2021.
-
NB: Measurements were taken fortnightly, rather than weekly, between weeks 24 and 32 of 2021.
+**Code used to produce plot:** [Script to produce plot](https://github.com/ScilifelabDataCentre/pathogens-portal-visualisations/blob/main/wastewater/wastewater_data_stockholm.py). diff --git a/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md b/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md index 98055338c..a6316ceda 100644 --- a/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md +++ b/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md @@ -2,22 +2,20 @@ title: "Historiska data för Stockholm" plotly: true aliases: - - /sv/data_types/environment/wastewater/historic_stockholm/ - - /sv/dashboards/wastewater/historic_stockholm/ + - /sv/data_types/environment/wastewater/historic_stockholm/ + - /sv/dashboards/wastewater/historic_stockholm/ --- -Den här sidan visar data om mängden SARS-CoV-2 i Stockholm mellan april 2020 och augusti 2021 beräknat som genkopienummer/vecka (från avloppsvatten) standardiserat med bovint coronavirus+ PMMoV. Från september 2021 ändrades metoden. Se [den här sidan för de senaste uppgifterna](../). +Den här sidan visar data om mängden SARS-CoV-2 i Stockholm mellan april 2020 och augusti 2021 beräknat som genkopienummer/vecka (från avloppsvatten) standardiserat med bovint coronavirus+ PMMoV. Från september 2021 ändrades metoden. Se [den här sidan för de senaste uppgifterna](/dashboards/wastewater/covid_quantification/covid_quant_kth/). Data som visas här samlades in inom ett forskningsprojekt lett av prof. Zeynep Cetecioglu Gurol och kollegor (KTH) är ett samarbete mellan [SciLifeLab COVID-19 National Research Program](https://www.scilifelab.se/covid-19) och avdelningarna [SEED](https://www.kth.se/en/seed) och [Chemical Engineering](https://www.kth.se/ket/chemical-engineering-1.784196) vid KTH, i nära samarbete med Stockholm Vatten och Avfall och Käppala Association. Provtagningen av avloppsvatten började i mitten av april 2020 från Bromma, Henriksdal och Käppala reningsverk. Dessa reningsverk får avloppsvatten från en befolkning på cirka 360 000; 860 000 respektive 500 000. Se [den här kartan för det exakta avrinningsområdet för insamlingskanalerna i Käppala](/wastewater/map_Kappala.pdf) och [den här kartan för det exakta avrinningsområdet för insamlingskanalerna i Bromma och Henriksdal](/wastewater/map_Bromma_Henriksdal.pdf). -Efter koncentrering, filtrering och beredning analyserades proverna med RT-qPCR-teknik för SARS CoV-2 RNA. Primers mot nukleokapsidgenen (N) användes för att detektera SARS-COV-2-genen (tidigare använt och verifierat av [Medema et al (2020)](https://doi.org/10.1016/j.scitotenv.2020.142939). I vissa fall har det råa avloppsvattnet frusits ​​vid –20 °C och koncentrerat avloppsvatten eller renat RNA har lagrats vid -80°C innan nästa analyssteg genomfördes. Koncentrationsmetoden som använddes av prof. Zeynep Cetecioglu Gurol och hennes kollegor baseras på forskargruppens publicerade artikel ([Jafferali et al, 2021](https://doi.org/10.1016/j.scitotenv.2020.142939)) som jämför fyra olika metoder för att koncentrera avloppsvatten. Studiens slutsats var att den dubbla ultrafiltreringsmetoden som anpassats av KTH gruppen har betydligt högre effektivitet jämfört med enstaka filtrerings- och adsorptionsmetoder. För detaljerad information om metoden, se publikationen. +Efter koncentrering, filtrering och beredning analyserades proverna med RT-qPCR-teknik för SARS CoV-2 RNA. Primers mot nukleokapsidgenen (N) användes för att detektera SARS-COV-2-genen (tidigare använt och verifierat av [Medema _et al._ (2020)](https://doi.org/10.1016/j.scitotenv.2020.142939). I vissa fall har det råa avloppsvattnet frusits ​​vid –20 °C och koncentrerat avloppsvatten eller renat RNA har lagrats vid -80°C innan nästa analyssteg genomfördes. Koncentrationsmetoden som använddes av prof. Zeynep Cetecioglu Gurol och hennes kollegor baseras på forskargruppens publicerade artikel ([Jafferali _et al._, 2021](https://doi.org/10.1016/j.scitotenv.2020.142939)) som jämför fyra olika metoder för att koncentrera avloppsvatten. Studiens slutsats var att den dubbla ultrafiltreringsmetoden som anpassats av KTH gruppen har betydligt högre effektivitet jämfört med enstaka filtrerings- och adsorptionsmetoder. För detaljerad information om metoden, se publikationen. **Ladda ner data:** [Mängd SARS CoV-2 RNA per vecka i råavloppsvatten, med bovin faktor och PPMoV faktor, Excel-fil](https://blobserver.dc.scilifelab.se/blob/wastewater_data_Stockholm.xlsx). Uppgifterna delas av Inlet Henriksdal, Sickla, Hässelby, Järva, Riksby och Käppala. Data tillgänglig (delvis) från och med vecka 16 2020; uppdateras varje vecka. **Referera till detta dataset:** -Cetecioglu Z G, Williams, C, Khatami, K, Atasoy, M, Nandy, P, Jafferali, M H, Birgersson, M. SARS-CoV-2 Wastewater Data from Stockholm, Sweden. [https://doi.org/10.17044/scilifelab.14315483](https://doi.org/10.17044/scilifelab.14315483) (2021). - -**Källskod som används för att skapa grafen:** [Källskod](https://github.com/ScilifelabDataCentre/pathogens-portal-visualisations/blob/main/wastewater/wastewater_data_stockholm.py). +Cetecioglu, Z. G., Williams, C., Khatami, K., Atasoy, M., Nandy, P., Jafferali, M. H., Birgersson, M. (2021). SARS-CoV-2 Wastewater Data from Stockholm, Sweden. [https://doi.org/10.17044/scilifelab.14315483](https://doi.org/10.17044/scilifelab.14315483).
Skrolla grafen horisontellt för att se alla data. @@ -27,9 +25,6 @@ Cetecioglu Z G, Williams, C, Khatami, K, Atasoy, M, Nandy, P, Jafferali, M H, Bi
{{< plotly json="https://blobserver.dc.scilifelab.se/blob/wastewater_data_stockholm.json" height="550px">}}
-
NB: Alla prover innan vecka 21 har kommit till labbet vecka 21. Mellan vecka 21 och 33 har prover analyserats varannan vecka. Efter vecka 33 har proverna analyserats varje vecka.
- -
NB: Avloppsvattenmätningarna har utförts varannan vecka, inte veckovis, mellan vecka 24 och vecka 32 2021.
- - +
Alla prover innan vecka 21 har kommit till labbet vecka 21. Mellan vecka 21 och 33 har prover analyserats varannan vecka. Efter vecka 33 har proverna analyserats varje vecka. Avloppsvattenmätningarna har utförts varannan vecka, inte veckovis, mellan vecka 24 och vecka 32 2021.
+**Källskod som används för att skapa grafen:** [Källskod](https://github.com/ScilifelabDataCentre/pathogens-portal-visualisations/blob/main/wastewater/wastewater_data_stockholm.py). From 0651783551a6039ef67a30d3b7fbc0171395ed49 Mon Sep 17 00:00:00 2001 From: Senthilkumar Panneerselvam Date: Tue, 21 May 2024 13:56:42 +0200 Subject: [PATCH 3/6] Minor fix for multi-word topics --- layouts/topics/single.html | 9 +++++---- 1 file changed, 5 insertions(+), 4 deletions(-) diff --git a/layouts/topics/single.html b/layouts/topics/single.html index dae2243a3..4819346ff 100644 --- a/layouts/topics/single.html +++ b/layouts/topics/single.html @@ -1,7 +1,8 @@ {{ define "main" }} {{ $page_topic := .Page.Params.topic }} -{{ $topic_key := $page_topic | urlize }} +{{ $topic_key := $page_topic | lower }} +{{ $topic_key_url := $page_topic | urlize }} {{ .Content }} @@ -13,7 +14,7 @@

Data highlights ({{ $n_dh }})

{{- partial "highlights.html" . -}}
- See all data highlights on {{ $page_topic }} ({{ $n_dh }}) + See all data highlights on {{ $page_topic }} ({{ $n_dh }})
@@ -27,7 +28,7 @@

Data highlights ({{ $n_dh }})

Dashboards ({{ $n_db }})

{{- partial "dashboards.html" . -}} -
See all dashboards +
See all dashboards on {{ $page_topic }} ({{ $n_db }})
@@ -39,7 +40,7 @@

Dashboards ({{ $n_db }})

Editorials ({{ $n_ed }})

{{- partial "editorials.html" . -}} -
See all editorials +
See all editorials on {{ $page_topic }} ({{ $n_ed }})
From 1ce6d241e2c8894bd35a231ae7ce7d1102a467cb Mon Sep 17 00:00:00 2001 From: LianeHughes <68756672+LianeHughes@users.noreply.github.com> Date: Thu, 23 May 2024 11:42:08 +0200 Subject: [PATCH 4/6] correct Swedish text on small screens --- .../wastewater/covid_quantification/historic_stockholm.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md b/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md index a6316ceda..363b5c0c0 100644 --- a/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md +++ b/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md @@ -18,7 +18,7 @@ Efter koncentrering, filtrering och beredning analyserades proverna med RT-qPCR- Cetecioglu, Z. G., Williams, C., Khatami, K., Atasoy, M., Nandy, P., Jafferali, M. H., Birgersson, M. (2021). SARS-CoV-2 Wastewater Data from Stockholm, Sweden. [https://doi.org/10.17044/scilifelab.14315483](https://doi.org/10.17044/scilifelab.14315483).
- Skrolla grafen horisontellt för att se alla data. + Att rotera mobiltelefonen kan förbättra grafens layout.
From 6ed0bcf31ec07aed37f0100fb917514d79fe4829 Mon Sep 17 00:00:00 2001 From: LianeHughes <68756672+LianeHughes@users.noreply.github.com> Date: Thu, 23 May 2024 11:44:52 +0200 Subject: [PATCH 5/6] update links given name change --- .../wastewater/covid_quantification/historic_stockholm.md | 2 +- .../wastewater/covid_quantification/historic_stockholm.md | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/content/english/dashboards/wastewater/covid_quantification/historic_stockholm.md b/content/english/dashboards/wastewater/covid_quantification/historic_stockholm.md index 01a8e7c15..d9dbd4ca3 100644 --- a/content/english/dashboards/wastewater/covid_quantification/historic_stockholm.md +++ b/content/english/dashboards/wastewater/covid_quantification/historic_stockholm.md @@ -27,4 +27,4 @@ Cetecioglu, Z. G., Williams, C., Khatami, K., Atasoy, M., Nandy, P., Jafferali,
All samples up until week 21 of 2020 were received by the lab in week 21. Between weeks 21 and 33 of 2020, samples were analysed biweekly. After week 33 of 2020, samples were typically analysed weekly, although measurements were taken fortnightly, rather than weekly, between weeks 24 and 32 of 2021.
-**Code used to produce plot:** [Script to produce plot](https://github.com/ScilifelabDataCentre/pathogens-portal-visualisations/blob/main/wastewater/wastewater_data_stockholm.py). +**Code used to produce plot:** [Script to produce plot](https://github.com/ScilifelabDataCentre/pathogens-portal-visualisations/blob/main/wastewater/historic_stockholm_data.py). diff --git a/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md b/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md index 363b5c0c0..3e7045edd 100644 --- a/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md +++ b/content/svenska/dashboards/wastewater/covid_quantification/historic_stockholm.md @@ -27,4 +27,4 @@ Cetecioglu, Z. G., Williams, C., Khatami, K., Atasoy, M., Nandy, P., Jafferali,
Alla prover innan vecka 21 har kommit till labbet vecka 21. Mellan vecka 21 och 33 har prover analyserats varannan vecka. Efter vecka 33 har proverna analyserats varje vecka. Avloppsvattenmätningarna har utförts varannan vecka, inte veckovis, mellan vecka 24 och vecka 32 2021.
-**Källskod som används för att skapa grafen:** [Källskod](https://github.com/ScilifelabDataCentre/pathogens-portal-visualisations/blob/main/wastewater/wastewater_data_stockholm.py). +**Källskod som används för att skapa grafen:** [Källskod](https://github.com/ScilifelabDataCentre/pathogens-portal-visualisations/blob/main/wastewater/historic_stockholm_data.py). From f79f3081b650abfc0f3560dc3662978bd1435437 Mon Sep 17 00:00:00 2001 From: Senthilkumar Panneerselvam Date: Thu, 23 May 2024 13:25:46 +0200 Subject: [PATCH 6/6] Fix all topics in homepage --- layouts/index.html | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/layouts/index.html b/layouts/index.html index 50ce75787..87df43fdf 100644 --- a/layouts/index.html +++ b/layouts/index.html @@ -182,7 +182,7 @@
Biobanks

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Click on one of the topics below to see only the content that is related to that topic.

- {{ range .Site.Menus.topics_menu }} + {{ range where .Site.Menus.topics_menu "Identifier" "ne" "all_topics" }} {{ .Name }} {{ end }}