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clinvcf installation error #3

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RP-Bioinfo opened this issue Dec 27, 2023 · 1 comment
Open

clinvcf installation error #3

RP-Bioinfo opened this issue Dec 27, 2023 · 1 comment

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@RP-Bioinfo
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Dear developers,

I'ive installed all packages required for clinvcf compiling but when I launch the command "nimble install" the process fails with the following message:

"Executing /home/rpracella/.nimble/bin/nim c --colors:on --noNimblePath -d:release -d:NimblePkgVersion=0.0.1 --path:/home/rpracella/.nimble/pkgs2/unicodedb-0.12.0-4452416471e2fe8726eb6070ed6ea7368171cc09 --path:/home/rpracella/.nimble/pkgs2/regex-0.23.0-89466caa353b571cdcd8271f2c797ba2c15a89f2 --path:/home/rpracella/.nimble/pkgs2/docopt-0.7.1-387f1ae17f3b7620c7814cf44a52d3d91b8906e9 --path:/home/rpracella/.nimble/pkgs2/tiny_sqlite-0.2.0-0efd42349aa1792d82a82b833014311b51be8051 --path:/home/rpracella/.nimble/pkgs2/q-0.0.8-398d2298391a06be1151dcaa6aadd50d84a327ec --path:/home/rpracella/.nimble/pkgs2/hts-0.2.23-d282c5a3bd0e70cdba01bb5809e8435ba7771ca7 -o:/home/rpracella/clinvcf/clinvcf /home/rpracella/clinvcf/src/clinvcf.nim
Hint: used config file '/home/rpracella/.choosenim/toolchains/nim-2.0.2/config/nim.cfg' [Conf]
Hint: used config file '/home/rpracella/.choosenim/toolchains/nim-2.0.2/config/config.nims' [Conf]
......................................................................................................................................................................
/home/rpracella/.nimble/pkgs2/hts-0.2.23-d282c5a3bd0e70cdba01bb5809e8435ba7771ca7/hts/private/hts_concat.nim(1, 2) Error: invalid indentation
nimble.nim(229) buildFromDir

Error:  Build failed for the package: clinvcf
 Info:  Nimble data file "/home/rpracella/.nimble/nimbledata2.json" has been saved."

What's the problem?

Best Wishes,

Riccardo Pracella

@mproberts99
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Hi, did you ever get this resolved? I'm having the same issue

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