diff --git a/README.md b/README.md index eef0511..6d621bc 100644 --- a/README.md +++ b/README.md @@ -1,5 +1,5 @@ [![License: GPL v3](https://img.shields.io/badge/License-GPL%20v3-blue.svg)](https://github.com/Serka-M/mmlong2-lite/blob/main/LICENSE) -[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.7607335.svg)](https://doi.org/10.5281/zenodo.7607335) +[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.8013498.svg)](https://doi.org/10.5281/zenodo.8013498)

logo @@ -23,8 +23,8 @@ mmlong2-lite is the microbial genome production part of the [mmlong2](https://gi ### Installation (Conda): To create a local [Conda](https://docs.conda.io/projects/conda/en/latest/user-guide/install/linux.html) environment for running mmlong2-lite workflow, just copy-paste the following: ``` -conda create --prefix mmlong2-lite -c conda-forge -c bioconda snakemake=7.19.1 singularity=3.8.6 zenodo_get=1.3.4 pv=1.6.6 pigz=2.6 tar=1.34 -y -conda activate ./mmlong2-lite || source activate ./mmlong2-lite && zenodo_get -r 7607335 -o mmlong2-lite/bin +conda create --prefix mmlong2-lite -c conda-forge -c bioconda snakemake=7.26.0 singularity=3.8.6 zenodo_get=1.3.4 pv=1.6.6 pigz=2.6 tar=1.34 -y +conda activate ./mmlong2-lite || source activate ./mmlong2-lite && zenodo_get -r 8013498 -o mmlong2-lite/bin pv mmlong2-lite/bin/sing-mmlong2-lite*.tar.gz | pigz -dc - | tar xf - -C mmlong2-lite/bin/. && chmod +x mmlong2-lite/bin/mmlong2-lite ```