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Added
Support for .afa (as FASTA) and .fq (as FASTQ) in input/output handling (#26)
Changed
Replaced Rhesus germline reference "bernat2021" with "kimdb" version 1.1, containing additions and corrections since the original publication, and added a CSV of germline reference information (#28)
Fixed
vdj-match now skips references that are missing gene segments but were only included implicitly rather than directly named (#25)