diff --git a/05_basic_registration.ipynb b/05_basic_registration.ipynb index 42d92b5..36372d7 100644 --- a/05_basic_registration.ipynb +++ b/05_basic_registration.ipynb @@ -146,7 +146,7 @@ "source": [ "## Read images\n", "\n", - "We first read the images, specifying the pixel type that is required for registration (Float32 or Float64) and look at them. In this notebook we use a CT and MR image from the same patient. These are part of the training data from the Retrospective Image Registration Evaluation (RIRE) project." + "We first read the images, specifying the pixel type that is required for registration (Float32 or Float64) and look at them. In this notebook we use a CT and MR image from the same patient. These are part of the training data from the Retrospective Image Registration Evaluation (RIRE) project." ] }, { diff --git a/08_segmentation_and_shape_analysis.ipynb b/08_segmentation_and_shape_analysis.ipynb index f24941d..452e962 100644 --- a/08_segmentation_and_shape_analysis.ipynb +++ b/08_segmentation_and_shape_analysis.ipynb @@ -261,7 +261,7 @@ "seeds = sitk.RelabelComponent(seeds, minimumObjectSize=15)\n", "# Run the watershed segmentation using the distance map and seeds.\n", "ws = sitk.MorphologicalWatershedFromMarkers(dist_img, seeds, markWatershedLine=True)\n", - "ws = sitk.Mask(ws, sitk.Cast(cleaned_thresh_img, ws.GetPixelID()))" + "ws = sitk.Mask(ws, sitk.Cast(cleaned_thresh_img, sitk.sitkUInt8))" ] }, {