Main tool: lima
Code repository: https://github.com/PacificBiosciences/barcoding
Basic information on how to use this tool:
- executables: lima, lima-undo
- help: -h
- version: --version
- description: lima is the standard tool to identify barcode and primer sequences in PacBio single-molecule sequencing data.
Full documentation: https://lima.how/
lima [options] <INPUT.bam|xml|fa|fq|gz> <BARCODES.fa> <OUTPUT.bam|xml|fa|fq|gz>