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test_numpy_ssa_solver.py
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# GillesPy2 is a modeling toolkit for biochemical simulation.
# Copyright (C) 2019-2024 GillesPy2 developers.
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
import unittest
from gillespy2.core.gillespyError import SimulationError
from example_models import create_decay, create_decay_no_tspan
from gillespy2 import NumPySSASolver
class TestNumPySSASolver(unittest.TestCase):
def setUp(self):
self.model = create_decay()
self.solver = NumPySSASolver(model=self.model)
self.model_no_tspan = create_decay_no_tspan()
self.solver_no_tspan = NumPySSASolver(model=self.model_no_tspan)
def test_run_example__with_increment_only(self):
results = self.solver_no_tspan.run(increment=0.2)
def test_run_example__with_tspan_only(self):
results = self.solver.run()
def test_run_example__with_tspan_and_increment(self):
with self.assertRaises(SimulationError):
results = self.solver.run(increment=0.2)
if __name__ == '__main__':
unittest.main()