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Welcome to the FICLE wiki!

Wiki contents:

• Introduction
  • Aims and motivation
  • Recommended workflow before FICLE
• How does FICLE work?
  • Parsing through genome reference annotations
  • Alternative splicing event classifications
• Running FICLE
  • Structure
  • Dependencies
  • Installation
  • Pre-requisites
  • Getting ready
  • FICLE arguments and usage
  • Usage example
• Understanding the output of FICLE
• Version history
  • Stats
    • General
    • A5A3
    • Exon skipping (ES)
    • Intron retention (IR)
    • Novel exons (NE)
  • Tracks