Snakemake pipeline for identifying antibiotic-resistance genes in metagenomic samples and assign bacterial taxa to them.
Requirements: Snakemake, MetaSPades, star-amr, Kraken2, BLAST, BioPython
-
Notifications
You must be signed in to change notification settings - Fork 0
TakacsBertalan/ar_species
Folders and files
| Name | Name | Last commit message | Last commit date | |
|---|---|---|---|---|
Repository files navigation
About
Snakemake pipeline for finding antimicrobial resistance genes in metagenomic samples and finding the corresponding species
Resources
Stars
Watchers
Forks
Releases
No releases published
Packages 0
No packages published