setup-env.sh

#!/bin/bash

# set to the directory where the harvester was installed or unpacked
# HARVESTER_INSTALL_DIR is set to the location of the installed harvester
#	If the deb file was used to install the harvester then the
#	directory should be set to /usr/share/vivo/harvester which is the
#	current location associated with the deb installation.
#	Since it is also possible the harvester was installed by
#	uncompressing the tar.gz the setting is available to be changed
#	and should agree with the installation location
HARVESTER_INSTALL_DIR=/usr/local/src/VIVO-Harvester

# Add harvester binaries to path for execution
# The tools within this script refer to binaries supplied within the harvester
#	Since they can be located in another directory their path should be
#	included within the classpath and the path environment variables.
export PATH=$PATH:$HARVESTER_INSTALL_DIR/bin
export CLASSPATH=$CLASSPATH:$HARVESTER_INSTALL_DIR/bin/harvester.jar:$HARVESTER_INSTALL_DIR/bin/dependency/*
export CLASSPATH=$CLASSPATH:$HARVESTER_INSTALL_DIR/build/harvester.jar:$HARVESTER_INSTALL_DIR/build/dependency/*