BMI203_HW3

Homework 3 for UCSF Algorithms course

Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
sequences		sequences
smithwaterman		smithwaterman
test		test
BLOSUM50		BLOSUM50
BLOSUM50_Optimization.png		BLOSUM50_Optimization.png
BLOSUM62		BLOSUM62
Histograms.png		Histograms.png
MATIO		MATIO
MATIO_Optimization.png		MATIO_Optimization.png
Negpairs.txt		Negpairs.txt
NormedScoresROC.png		NormedScoresROC.png
Optimized_BLOSUM50_ROC_Static.png		Optimized_BLOSUM50_ROC_Static.png
Optimized_BLOSUM50_ROC_alignment.png		Optimized_BLOSUM50_ROC_alignment.png
Optimized_MATIO_ROC.png		Optimized_MATIO_ROC.png
Optimized_MATIO_ROC_Static.png		Optimized_MATIO_ROC_Static.png
Optimized_MATIO_ROC_alignment.png		Optimized_MATIO_ROC_alignment.png
PAM100		PAM100
PAM250		PAM250
Pospairs.txt		Pospairs.txt
README.md		README.md
ROC.png		ROC.png
Report.docx		Report.docx
gap_array.py		gap_array.py
gapdata.npy		gapdata.npy
gaps_fpr.png		gaps_fpr.png
lengthdata.png		lengthdata.png
norm_scores_rand.png		norm_scores_rand.png
p_norm_scores_rand.png		p_norm_scores_rand.png
raw_scores_rand.png		raw_scores_rand.png

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