nf-core-contributors.yaml

# nf-core contributors. Add yourself below to be featured on the website
# ----------------------------------------------------------------------
# Note that image_fn should correspond to logos in:
#    /public_html/assets/img/contributors-white
#    /public_html/assets/img/contributors-colour
# Please use svg images if possible.

contributors:

    - full_name: National Genomics Infrastructure
      short_name: NGI
      description: >
        The NGI provides next-generation sequencing services for Swedish academic groups.
        Many of the nf-core pipelines started life as SciLifeLab / NGI workflows.
      affiliation: SciLifeLab
      address: Tomtebodavägen 23A, 17165 Solna, Sweden
      url: https://ngisweden.scilifelab.se/
      affiliation_url: https://www.scilifelab.se/
      image_fn: NGI.svg
      contact: Phil Ewels
      contact_email: phil.ewels@scilifelab.se
      contact_github: ewels
      location: [59.3505174, 18.0221508]
      twitter: ngisweden

    - full_name: Quantitative Biology Center
      short_name: QBiC
      description: >
        The Quantitative Biology Center provides a one-stop-shop for access to high-throughput
        technologies in the life sciences and the required bioinformatics analysis.
        As a bioinformatics core facility, we provide advanced data analysis techniques.
      affiliation: Universität Tübingen
      address: Auf der Morgenstelle 10, 72076 Tübingen, Germany
      url: http://qbic.life
      affiliation_url: https://www.uni-tuebingen.de
      image_fn: QBiC.svg
      contact: Alexander Peltzer
      contact_email: alex.peltzer@mailbox.org
      contact_github: apeltzer
      location: [48.5379169, 9.0339095]
      twitter: QBIC_tue

    - full_name: Centre for Genomic Regulation
      short_name: CRG
      description: >
        The Centre for Genomic Regulation (CRG) is an international biomedical research institute
        of excellence, based in Barcelona, Spain, whose mission is to discover and advance knowledge
        for the benefit of society and public health.
      address: Carrer Dr. Aiguader, 88, 08003 Barcelona, Spain
      url: http://www.crg.eu/
      image_fn: CRG.svg
      contact: Paolo Di Tommaso
      contact_email: paolo.ditommaso@crg.eu
      contact_github: pditommaso
      location: [41.3853828, 2.191863]
      twitter: CRGenomica

    - full_name: Genome Institute of Singapore
      short_name: GIS
      description: >
        The Genome Institute of Singapore (GIS) is a national initiative for Singapore with a global vision that
        seeks to use genomic sciences to achieve extraordinary improvements in human health and public prosperity.
      address: 60 Biopolis St, Singapore 138672, Singapore
      url: https://www.a-star.edu.sg/gis
      affiliation_url: https://www.a-star.edu.sg
      image_fn: GIS.svg
      contact: Jonathan Göke
      contact_email: gokej@gis.a-star.edu.sg
      contact_github: jonathangoeke
      location: [1.3025202, 103.7904214]
      twitter: astar_gis

    - full_name: The Francis Crick Institute
      short_name: Francis Crick
      description: >
        The Francis Crick Institute is an organisation dedicated to understanding the fundamental biology
        underlying health and disease.
      address: 1 Midland Rd, London NW1 1ST
      url: https://www.crick.ac.uk/
      image_fn: crick.svg
      contact: Harshil Patel
      contact_email: harshil.patel@crick.ac.uk
      contact_github: drpatelh
      location: [51.5317308, -0.129134219]
      twitter: TheCrick

    - full_name: The Competence Centre for Genome Analysis Kiel
      short_name: CCGA Kiel
      description: >
        The Competence Centre for Genome Analysis Kiel is funded by the
        German Research Foundation and specialises in high-throughput sequencing of genomes.
      address: Christian-Albrechts-Platz 4, 24118 Kiel, Germany
      url: https://www.uni-kiel.de/en/research/research-infrastructures/
      contact: Marc Hoeppner
      contact_email: mphoeppner@gmail.com
      contact_github: marchoeppner
      location: [54.346058, 10.1125135]
      twitter: kieluni

    - full_name: The Wellcome Trust Sanger Institute
      short_name: Sanger
      description: >
        The Wellcome Sanger Institute is one of the premier centres of genomic discovery and
        understanding in the world. It leads ambitious collaborations across the globe to provide
        the foundations for further research and transformative healthcare innovations.
      address: Wellcome Trust Genome Campus, Hinxton CB10 1SA, United Kingdom
      url: https://www.sanger.ac.uk/
      image_fn: sanger.svg
      contact: Vladimir Kiselev
      contact_email: vk6@sanger.ac.uk
      contact_github: wikiselev
      location: [52.0797204, 0.1833987]
      twitter: sangerinstitute

    - full_name: Beatson Institute & Institute of Cancer Sciences
      short_name: BICR
      affiliation: Cancer Research UK, University of Glasgow
      description: >
        The Beatson Institute is one of Cancer Research UK’s core-funded institutes.
        They have built an excellent reputation for basic cancer research, including world-class
        metabolism studies and renowned in vivo modelling of tumour growth and metastasis.
      address: Garscube Estate, Switchback Road, Bearsden, Glasgow G61 1BD, United Kingdom
      url: http://www.beatson.gla.ac.uk
      affiliation_url: https://www.cancerresearchuk.org/
      image_fn: BICR.svg
      contact: Peter Bailey
      contact_email: Peter.Bailey.2@glasgow.ac.uk
      contact_github: PeterBailey
      location: [55.906079, -4.324084]
      twitter: CRUK_BI

    - full_name: Swedish University of Agricultural Sciences
      short_name: SLU
      description: >
        The Swedish University of Agricultural Sciences is an international organisation
        providing top class research, education and environmental analysis in the sciences for sustainable life.
      address: Almas Allé 8, 75007 Uppsala, Sweden
      url: https://www.slu.se/
      image_fn: slu.svg
      contact: Hadrien Gourlée
      contact_email: hadrien.gourle@slu.se
      contact_github: HadrienG
      location: [59.8149497, 17.6606801]
      twitter: _slu

    - full_name: International Agency for Research on Cancer
      short_name: IARC
      description: >
        The International Agency for Research on Cancer is the specialized cancer agency of the World Health Organization.
        The objective of the IARC is to promote international collaboration in cancer research.
      affiliation: World Health Organisation
      address: 150 Cours Albert Thomas, 69372 Lyon CEDEX 08, France
      url: https://www.iarc.fr
      affiliation_url: http://www.who.int/
      image_fn: IARC.svg
      contact: Matthieu Foll
      contact_email: FollM@iarc.fr
      contact_github: mfoll
      location: [45.7438643, 4.8735019]
      twitter: iarcwho

    - full_name: Lifebit Biotech
      short_name: Lifebit
      description: >
        Lifebit is a London-based biotech start-up which offers an intelligent genomics platform to researchers
        and their corresponding organisations for scalable, modular and reproducible genomic analysis.
      address: 338 City Road, London, England, EC1V 2PY
      url: https://lifebit.ai/
      image_fn: lifebit.svg
      contact: Phil Palmer
      contact_email: phil@lifebit.ai
      contact_github: PhilPalmer
      location: [51.530731, -0.102373]
      twitter: lifebitAI

    - full_name: Sun Yat-sen University Cancer Center
      short_name: SYSUCC
      description: >
        Sun Yat-sen University Cancer Center is a comprehensive cancer centre which provides clinical care to patients,
        education (students & CME), perform research and prevention activities.
      address: 651, Dongfeng East Road, Guangzhou, Guangdong, China
      url: http://sysucc.org.cn/
      image_fn: sysucc.png
      contact: Qi Zhao
      contact_email: zhaoqi@sysucc.org.cn
      contact_github: likelet
      location: [23.1314683032,113.2899452059]

    - full_name: BioFrontiers Institute at University of Colorado, Boulder
      short_name: CUBoulder
      description: >
        The BioFrontiers Institute at the University of Colorado (CU) is an interdisciplinary hub for
        bioscience research and education with a focus on improving human health.
      affiliation: DowellLab
      address: 3415 Colorado Avenue, Boulder, CO 80303, USA
      url: https://www.colorado.edu/biofrontiers/
      affiliation_url: http://dowell.colorado.edu/
      image_fn: cu-logo.svg
      contact: Ignacio Tripodi
      contact_email: ignacio.tripodi@colorado.edu
      contact_github: ignaciot
      location: [40.007528, -105.248992]
      twitter: BioFrontiers

    - full_name: Gregor Mendel Institute of Molecular Plant Biology
      short_name: GMI
      description: >
        The Gregor Mendel Institute of Molecular Plant Biology, an Institute of the Austrian Academy of Sciences,
        is dedicated to basic research in diverse aspects of plant molecular biology.
      affiliation: Austrian Academy of Sciences
      address: Dr.-Bohr-Gasse 3, 1030 Vienna, Austria
      url: https://gmi.oeaw.ac.at/
      affiliation_url: https://www.oeaw.ac.at/
      image_fn: GMI.svg
      contact: Patrick Hüther
      contact_email: patrick.huether@gmi.oeaw.ac.at
      contact_github: phue
      location: [48.189641, 16.401923]
      twitter: gmivienna

    - full_name: Research Institute of Molecular Pathology IMP
      short_name: IMP
      description: >
        The Research Institute of Molecular Pathology (IMP) is a basic research institute in
        molecular biology, based at the Vienna Biocenter in Austria.
      address: Campus-Vienna-Biocenter 1, 1030 Vienna, Austria
      url: https://www.imp.ac.at/
      image_fn: IMP.svg
      contact: Tobias Neumann
      contact_email: tobias.neumann@imp.ac.at
      contact_github: t-neumann
      location: [48.189224, 16.402660]
      twitter: IMPvienna

    - full_name: City of Hope
      short_name: COH
      description: >
        City of Hope is a private, not-for-profit clinical research center, hospital and graduate medical school
        located in Duarte, California, United States.
      address: 1500 E Duarte Rd, Duarte, CA 91010, USA
      url: https://www.cityofhope.org
      image_fn: COH.svg
      contact: Denis O'Meally
      contact_email: domeally@coh.org
      contact_github: drejom
      location: [34.1298, -117.9711]
      twitter: cityofhope

    - full_name: Indian Institute of Science Education and Research Mohali
      short_name: IISERM
      description: >
        IISER Mohali is an autonomous academic and research institution at Mohali, Punjab, India.
      address: Knowledge city, Sector 81, Manauli PO, Sahibzada Ajit Singh Nagar, Punjab 140306
      url: http://www.iisermohali.ac.in/
      image_fn: IISER.svg
      contact: Sangram Keshari Sahu
      contact_email: sangramk@iisermohali.ac.in
      contact_github: sk-sahu
      location: [30.665125, 76.730071]
      twitter: IiserMohali

    - full_name: Max Planck Institute for the Science of Human History
      short_name: MPI-SHH
      description: >
        The Max Planck Institute for the Science of Human History (MPI-SHH) in Jena was founded in 2014
        to target fundamental questions of human history and evolution since the Paleolithic.
      address: Kahlaische Strasse 10, 07445 Jena
      url: https://www.shh.mpg.de/en
      image_fn: shh.svg
      contact: James A. Fellows Yates
      contact_email: fellows@shh.mpg.de
      contact_github: jfy133
      location: [50.9176076,11.5771062]
      twitter: mpi_shh

    - full_name: German Center for Neurodegenerative Diseases
      short_name: DZNE
      description: >
            The DZNE investigates the causes of neurodegenerative diseases and develops novel strategies
            for prevention, treatment and care.
      affiliation: Helmholtz Association
      address: Sigmund-Freud-Straße 27, 53127 Bonn
      url: https://www.dzne.de/en
      affiliation_url: https://www.helmholtz.de/en/
      image_fn: dzne.svg
      contact: Kevin Menden
      contact_email: kevin.menden@dzne.de
      contact_github: kevinmenden
      location: [50.697147,7.106522]
      twitter: DZNE_en

    - full_name: New York University
      short_name: NYU
      description: >
            Founded in 1831, New York University is now one of the largest private universities in the United States.
            Of the more than 3,000 colleges and universities in America, New York University is one of only 60 member institutions
            of the distinguished Association of American Universities.
      address: 50 West 4th Street New York, NY 10012
      url: https://www.nyu.edu
      image_fn: nyu.svg
      contact: Tobias Schraink
      contact_email: tobias.schraink@nyumc.org
      contact_github: tobsecret
      location: [40.7290421,-73.9988925]
      twitter: nyuniversity

    - full_name: Royal Botanic Gardens Victoria
      short_name: RBGV
      description: >
              Royal Botanic Gardens Victoria is one of the world's leading botanic gardens and a centre of excellence
              for horticulture, science and education.
      address: Birdwood Avenue, Melbourne, Victoria, Australia, 3004
      url: https://www.rbg.vic.gov.au
      affiliation_url: https://www.rbg.vic.gov.au
      image_fn: rbgv.svg
      contact: Anna Syme
      contact_email: anna.syme@rbg.vic.gov.au
      contact_github: annasyme
      location: [-37.829856, 144.979595]
      twitter: RBG_Victoria

    - full_name: National Bioinformatics Infrastructure Sweden
      short_name: NBIS
      description: >
        NBIS is a distributed national bioinformatics infrastructure, supporting life sciences in Sweden.
      affiliation: SciLifeLab
      address: Tomtebodavägen 23A, 17165 Solna, Sweden
      url: https://nbis.se/
      affiliation_url: https://www.scilifelab.se/
      image_fn: NBIS.svg
      contact: Mahesh Binzer-Panchal
      contact_email: mahesh.panchal@nbis.se
      contact_github: mahesh-panchal
      location: [59.3505174, 18.0221508]
      twitter: NBISwe

    - full_name: Institut Curie
      short_name: Curie
      description: >
            The Institut Curie is a private nonprofit organization created in 1909 which combines a leading European cancer research center with a hospital group. The Institut Curie Bioinformatics platform is composed of biostatisticians and software engineers who offer a multidisciplinary expertise to support the biotechnological platforms, the research units and the hospital in their daily activities.
      affiliation: Bioinformatics platform
      address: 26 rue d'Ulm, 75248 Paris Cedex 05, France
      url:  https://science.institut-curie.org
      affiliation_url: https://science.institut-curie.org/platforms/bioinformatics/
      image_fn: curie.svg
      contact: Nicolas Servant
      contact_email: nicolas.servant@curie.fr
      contact_github: nservant
      location: [48.8534,2.3488]
      twitter: institut_curie

    - full_name: Chan Zuckerberg Biohub
      short_name: CZ Biohub
      description: >
        CZ Biohub is an independent, non-profit medical research organization working in collaboration with UC San Francisco, Stanford University and UC Berkeley. Our vision is to develop and apply technologies that will enable doctors to cure, prevent or manage all diseases during our children’s lifetime.
      address: 499 Illinois St, San Francisco, CA, 94158
      url: https://www.czbiohub.org/
      image_fn: czbiohub.svg
      contact: Olga Botvinnik
      contact_email: olga.botvinnik@czbiohub.org
      contact_github: olgabot
      location: [37.765757, -122.387945]
      twitter: czbiohub

    - full_name: The Picower for Learning and Memory
      short_name: PILM
      description: >
        The institute is focused on studying all aspects of learning and memory; specifically, it has received over US$50 million to study Alzheimer's, schizophrenia and similar diseases.
      affiliation: Bioinformatics Core
      address: 43 Vassar St, Cambridge, MA 02139
      url: https://picower.mit.edu/
      affiliation_url: https://pilm-bioinformatics.github.io/knowledgebase/
      image_fn: pilm.svg
      contact: Lorena Pantano
      contact_email: lpantano@mit.edu
      contact_github: lpantano
      location: [42.3623024, -71.0917659]
      twitter: mit_picower

    - full_name: University of California Berkeley
      short_name: UC Berkeley
      description: >
        Our mission in the RISE Lab at Unversity of California is to develop technologies that enable applications to interact intelligently and securely with their environment in real time.
      affiliation: RISE Lab
      address: 465 Soda Hall, MC-1776, Berkeley, CA 94720-1776
      url: https://www.berkeley.edu/
      affiliation_url: https://rise.cs.berkeley.edu/
      contact: Michael Heuer
      contact_github: heuermh
      image_fn: ucberkeley.svg
      location: [37.8753756,-122.259602]
      twitter: UCBerkeley

    - full_name: Institut Pasteur
      short_name: Pasteur
      description: >
        The Institut Pasteur is a private, non-profit foundation. Its mission is to help prevent and treat diseases, mainly those of infectious origin, through research, teaching, and public health initiatives.
      affiliation: Hub de Bioinformatique et Biostatistique
      address: 25-28 Rue du Dr Roux, 75015 Paris, France
      url: https://www.pasteur.fr/en
      affiliation_url: https://research.pasteur.fr/en/team/bioinformatics-and-biostatistics-hub/
      image_fn: pasteur.svg
      contact: Rémi Planel
      contact_email: rplanel@pasteur.fr
      contact_github: rplanel
      location: [48.840508, 2.311528]
      twitter: institutpasteur

    - full_name: International Institute of Information Technology - Bangalore
      short_name: IIIT-B
      description: >
        To build on the track record set by India in general and Bangalore in particular, to enable India to play a key role in the global IT scenario
        through a world class institute with a focus on education and research, entrepreneurship and innovation.
      address: 26/C, Electronics City, Hosur Road, Bangalore - 560100, India
      url: https://www.iiitb.ac.in/
      image_fn: iiitb.svg
      contact: Abhinav Sharma
      contact_email: abhinavsharma.dds10@iiitb.net
      contact_github: abhi18av
      location: [12.844722, 77.663056]
      twitter: iiitb_official

    - full_name: Max Planck Institute for Biochemistry
      short_name: MPIB
      description: >
        The Max Planck Institute of Biochemistry aims to understand the structure and function of proteins -
        from single molecules to complex organisms.
      affiliation: Technical University of Munich
      address: Am Klopferspitz 18, 82152 Planegg, Germany
      url: https://www.biochem.mpg.de/de
      affiliation_url: https://www.tum.de/en/
      image_fn: mpiblogo.svg
      contact: Drew Behrens
      contact_email: behrens@biochem.mpg.de
      contact_github: drewjbeh
      location: [48.105188, 11.459579]
      twitter: MPI_Biochem

    - full_name: Linnaeus University Centre for Ecology and Evolution in Microbial model Systems
      short_name: LNUc-EEMiS
      description: >
        The research that is carried out at the Linnaeus University Centre for
        Ecology and Evolution in Microbial model Systems (EEMiS) is focused on
        marine environments in the Baltic Sea – on the border between sea and
        land, in coastal waters and in the open sea.
      affiliation: Linnaeaus University, Kalmar
      address: Norra Kajplan, Kalmar (visiting address)
      url: https://lnu.se/en/research/searchresearch/linnaeus-university-centre-for-ecology-and-evolution-in-microbial-model-systems/
      affiliation_url: https://www.lnu.se
      image_fn: lnuc-eemis-logo.svg
      contact: Daniel Lundin
      contact_email: daniel.lundin@lnu.se
      contact_github: erikrikarddaniel
      location: [56.659756, 16.364226]
      twitter: linneuni
      
    - full_name: Baylor College of Medicine
      short_name: BCM
      description: >
        Baylor College of Medicine is a health sciences university that creates knowledge 
        and applies science and discoveries to further education, healthcare and community 
        service locally and globally.
      address: One Baylor Plaza, Houston, Texas 77030, USA
      url: https://www.bcm.edu/
      image_fn: bcm.svg
      contact: Michael Jochum
      contact_email: michael.jochum@bcm.edu
      contact_github: MADscientist314
      location: [29.710501, -95.396370]
      twitter: bcmhouston

    - full_name: The Hebrew University of Jerusalem
      short_name: HUJI
      affiliation: MethylGrammar Lab
      description: >
        The MethylGrammar Lab at the Hebrew University School of Medicine is developing tools
        for analyzing bisulfite sequencing and other epigenomic sequencing methods. We are
        interested in epigenomic biomarkers of disease, especially DNA methylation.
      address: Hadassah Ein Kerem Medical School, Jerusalem, Israel
      url: https://new.huji.ac.il/en
      affiliation_url: http://methylgrammarlab.org/
      image_fn: huji_final_logo.svg
      contact: Ben Berman
      contact_email: benjamin.berman@mail.huji.ac.il
      contact_github: benbfly
      location: [31.764656, 35.150221]
      twitter: Hujimed

    - full_name: Ardigen S.A.
      short_name: Ardigen
      description: >
        Ardigen is harnessing advanced Artificial Intelligence methods for novel precision medicine. We accelerate therapy development by decoding microbiome, designing immunity and providing digital drug discovery services. We are rooted in biology and hold deep expertise in bioinformatics, machine learning and software engineering.

      address: Podole 76, 30-394 Poland
      url: https://ardigen.com/
      image_fn: ardigen.svg
      contact: Piotr Faba
      contact_email: piotr.faba@ardigen.com
      contact_github: piotr-faba-ardigen
      location: [50.021348, 19.891909]
      twitter: Ardigen_SA

    - full_name: UCL Cancer Institute
      short_name: UCLcancer
      description: >
        The UCL Cancer Institute is the hub for cancer research at University College London, one of the World's leading universities. The Institute draws together over 400 talented scientists who are working together to translate research discoveries into developing kinder, more effective therapies for cancer patients. 
      address: 72 Huntley Street, London, WC1E 6DD.
      url: https://www.ucl.ac.uk/cancer
      image_fn: uclcancer.svg
      contact: Lucia Conde
      contact_email: l.conde@ucl.ac.uk
      contact_github: UCL-BLIC
      location: [51.523167, -0.134347]
      twitter: uclcancer