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Merge pull request #81 from UMCUGenetics/release/v2.0.2
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Update NextflowModules to v0.7.2
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@rernst
rernst authored Aug 11, 2023
2 parents a99460c + b24a835 commit 58af8eb
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion NextflowModules
Submodule NextflowModules updated 36 files
+2 −2 GATK/3.8-1-0-gf15c1c3ef/BaseRecalibrator.nf
+5 −1 GATK/3.8-1-0-gf15c1c3ef/CatVariants.nf
+10 −2 GATK/3.8-1-0-gf15c1c3ef/CombineVariants.nf
+1 −1 GATK/3.8-1-0-gf15c1c3ef/GenotypeGVCFs.nf
+2 −2 GATK/3.8-1-0-gf15c1c3ef/HaplotypeCaller.nf
+1 −1 GATK/3.8-1-0-gf15c1c3ef/IndelRealigner.nf
+1 −1 GATK/3.8-1-0-gf15c1c3ef/RealignerTargetCreator.nf
+5 −1 GATK/3.8-1-0-gf15c1c3ef/SelectVariants.nf
+5 −1 GATK/3.8-1-0-gf15c1c3ef/UnifiedGenotyper.nf
+15 −5 GATK/3.8-1-0-gf15c1c3ef/VariantFiltration.nf
+3 −4 GATK/4.1.3.0/BaseRecalibration.nf
+2 −2 GATK/4.1.3.0/BaseRecalibrationTable.nf
+1 −1 GATK/4.1.3.0/CollectMultipleMetrics.nf
+1 −1 GATK/4.1.3.0/CollectWGSMetrics.nf
+2 −1 GATK/4.1.3.0/CombineGVCFs.nf
+1 −1 GATK/4.1.3.0/GatherBaseRecalibrationTables.nf
+2 −1 GATK/4.1.3.0/GenotypeGVCFs.nf
+2 −1 GATK/4.1.3.0/HaplotypeCaller.nf
+3 −2 GATK/4.1.3.0/MergeVCFs.nf
+1 −1 GATK/4.1.3.0/SamToFastq.nf
+2 −1 GATK/4.1.3.0/SelectVariants.nf
+5 −4 GATK/4.1.3.0/SplitIntervals.nf
+3 −2 GATK/4.1.3.0/SplitNCigarReads.nf
+1 −1 GATK/4.1.3.0/VariantAnnotator.nf
+1 −1 GATK/4.1.3.0/VariantFiltration.nf
+4 −2 GATK/4.2.1.0/GenotypeGvcfs.nf
+4 −2 GATK/4.2.1.0/HaplotypeCaller.nf
+8 −2 GATK/4.2.1.0/MergeVcfs.nf
+2 −1 GATK/4.2.1.0/SelectVariants.nf
+13 −8 GATK/4.2.1.0/VariantFiltration.nf
+8 −1 Picard/2.22.0/CollectHsMetrics.nf
+7 −1 Picard/2.22.0/CollectMultipleMetrics.nf
+5 −1 Picard/2.22.0/CollectWgsMetrics.nf
+3 −1 Picard/2.22.0/CreateSequenceDictionary.nf
+5 −1 Picard/2.22.0/EstimateLibraryComplexity.nf
+2 −1 Picard/2.22.0/IntervalListTools.nf

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