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Genbank short version is downloaded #9

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stuber opened this issue Nov 19, 2020 · 0 comments
Open

Genbank short version is downloaded #9

stuber opened this issue Nov 19, 2020 · 0 comments

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@stuber
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stuber commented Nov 19, 2020

vsnp_fasta_gbk_gff_by_acc.py -b -a <ncbi accession> downloads the genbank short version and not the long version. The long version is needed by vSNP_step2.py to annotate tables. Manually downloading the long version from a web browser and placing into the dependency folder is current work around. Remember to check the file coding (UTF-8, LF).
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