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Update Pharmpy
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@rikardn
rikardn committed Nov 29, 2023
1 parent f7f23f1 commit f9a01a5
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion pharmpy
Submodule pharmpy updated 44 files
+31 −8 docs/amd.rst
+25 −13 docs/covsearch.rst
+1 −1 docs/getting_started.rst
+1 −1 docs/requirements.txt
+68 −26 docs/tools.rst
+2 −2 lint-requirements.txt
+1 −1 pretest-requirements.txt
+7 −7 requirements.txt
+1 −0 setup.cfg
+9 −12 src/pharmpy/model/external/nonmem/records/code_record.py
+1 −1 src/pharmpy/model/external/nonmem/records/grammars/code_record.lark
+20 −12 src/pharmpy/modeling/allometry.py
+2 −2 src/pharmpy/modeling/common.py
+46 −15 src/pharmpy/modeling/covariate_effect.py
+5 −1 src/pharmpy/modeling/error.py
+13 −3 src/pharmpy/modeling/lrt.py
+2 −2 src/pharmpy/modeling/odes.py
+68 −1 src/pharmpy/modeling/tmdd.py
+227 −22 src/pharmpy/tools/amd/run.py
+4 −4 src/pharmpy/tools/bootstrap/results.py
+2 −0 src/pharmpy/tools/common.py
+244 −125 src/pharmpy/tools/covsearch/tool.py
+3 −7 src/pharmpy/tools/external/rxode/run.py
+10 −8 src/pharmpy/tools/mfl/feature/covariate.py
+9 −1 src/pharmpy/tools/mfl/grammar.py
+62 −5 src/pharmpy/tools/mfl/parse.py
+4 −1 src/pharmpy/tools/mfl/statement/feature/absorption.py
+27 −4 src/pharmpy/tools/mfl/statement/feature/covariate.py
+4 −1 src/pharmpy/tools/mfl/statement/feature/elimination.py
+4 −1 src/pharmpy/tools/mfl/statement/feature/lagtime.py
+4 −1 src/pharmpy/tools/mfl/statement/feature/peripherals.py
+5 −0 src/pharmpy/tools/mfl/statement/feature/symbols.py
+13 −10 src/pharmpy/tools/mfl/statement/feature/transits.py
+17 −5 src/pharmpy/tools/mfl/stringify.py
+21 −21 src/pharmpy/tools/structsearch/tmdd.py
+15 −4 src/pharmpy/tools/structsearch/tool.py
+1 −1 test-requirements.txt
+36 −1 tests/integration/test_amd.py
+18 −45 tests/modeling/test_error.py
+2 −5 tests/modeling/test_metabolite.py
+49 −0 tests/modeling/test_tmdd.py
+8 −7 tests/tools/test_covsearch.py
+254 −167 tests/tools/test_mfl.py
+26 −8 tests/tools/test_structsearch.py

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