From 307aa7f2bb35aad6d69fb8e4e7a43cf1adfe83d4 Mon Sep 17 00:00:00 2001 From: gvegayon Date: Sun, 8 Sep 2024 00:47:52 +0000 Subject: [PATCH] Commit from GitHub Actions (Build it) --- README.md | 200 +++++++++++++++++++++++++++--------------------------- 1 file changed, 99 insertions(+), 101 deletions(-) diff --git a/README.md b/README.md index a88c0f3..da1d29a 100644 --- a/README.md +++ b/README.md @@ -9,151 +9,149 @@ document updated once a week or whenever there’s a push or pull request. It performs a search on PubMed looking for the latest papers about Agent-Based Models. The last -update was on 2024-09-01 00:52:00. +update was on 2024-09-08 00:47:51.
-1. **Enforced specificity of an animal symbiosis.** +1. **Use of agent-based modeling to analyze potential non-occupational + exposures to asbestos of the general population of Sibate + (Colombia).** - Wagner JM, Wong JH, Millar JG, Haxhimali E, Bruckner A, Naragon TH, - Boedicker JQ, Parker J. + Duraffour F, Ramos-Bonilla JP, Lysaniuk B. - bioRxiv \[Preprint\]. 2024 Aug 6:2024.08.04.606548. doi: - 10.1101/2024.08.04.606548. + Environ Monit Assess. 2024 Sep 6;196(10):900. doi: + 10.1007/s10661-024-13052-9. - > The strict fidelity of many such interspecies associations is - > posited to hinge on sensory tuning to host-derived cues, a model - > supported by studies of neural function in host-specific model - > species. …Remarkably, the rove beetle also performs its symbiotic - > behavior … + > The models utilized a multi-agent simulation process, focusing on + > a 10-year period (1986-1995). …A range of values for input data + > for the models were utilized, spanning from very conservative + > numbers to exposure-promoting values. … -2. **A model-based assessment of social isolation practices for - COVID-19 outbreak response in residential care facilities.** +2. **Epidemic spreading on mixing group with face-to-face + interaction.** - Zachreson C, Tobin R, Walker C, Conway E, Shearer FM, McVernon J, - Geard N. + Gu W, Li W, Gao F, Su S, Zhang Z, Liu X, Wang W. - BMC Infect Dis. 2024 Aug 29;24(1):880. doi: - 10.1186/s12879-024-09788-x. + Chaos. 2024 Sep 1;34(9):093108. doi: 10.1063/5.0222847. - > Such policies are controversial because of their association with - > adverse mental and physical health indicators and there is a lack - > of modelling that assesses their effectiveness. METHODS: In - > consultation with the Australian Government Department of Health - > and Aged Care, w … + > Despite the critical relevance of face-to-face interactions in + > real-world situations, there is a significant lack of + > comprehensive study addressing the unique issues of mixed groups, + > particularly those with complex face-to-face interactions. We + > introduce a novel model empl … -3. **Analyzing the impact of concealed carry weapons and school - resource officers on school shootings: An agent-based modeling - approach.** +3. **Moderate confirmation bias enhances decision-making in groups of + reinforcement-learning agents.** - Harrell NB, Weston RE, Alteri SP, Tzvetanov KT, Dietz JE. + Bergerot C, Barfuss W, Romanczuk P. - J Emerg Manag. 2024 Jul-Aug;22(4):369-388. doi: 10.5055/jem.0818. + PLoS Comput Biol. 2024 Sep 4;20(9):e1012404. doi: + 10.1371/journal.pcbi.1012404. Online ahead of print. - > This paper presents a simulation modeling study that examines the - > potential benefit of arming public school staff members with - > concealed carry weapons (CCWs) in combination with school resource - > officers (SROs) during active shooter events. By simulating real - > or hypothetica … + > To do so, we develop a Collective Asymmetric Reinforcement + > Learning (CARL) model in which artificial agents observe others’ + > actions and rewards, and update this information asymmetrically. + > We use agent-based simulations to study how confirmation bias + > affects … -4. **Optimizing Indoor Airport Navigation with Advanced Visible Light - Communication Systems.** +4. **The contribution of movement to social network structure and + spreading dynamics under simple and complex transmission.** - Vieira M, Vieira MA, Galvão G, Louro P, Vieira P, Fantoni A. + Chimento M, Farine DR. - Sensors (Basel). 2024 Aug 22;24(16):5445. doi: 10.3390/s24165445. + Philos Trans R Soc Lond B Biol Sci. 2024 Oct 21;379(1912):20220524. + doi: 10.1098/rstb.2022.0524. Epub 2024 Sep 4. - > The methodology includes the use of tetrachromatic LED-equipped - > luminaires with On-Off Keying (OOK) modulation and a mesh cellular - > hybrid structure. Detailed airport modeling and user analysis - > (pedestrians and luggage/passenger carriers) equipped with PINPIN - > optical sensor … + > Here, we examine the effect of the social-spatial interface on + > spreading dynamics using a simulation model. We quantify the + > relative effects of different movement rules (localized, + > semi-localized, nomadic and resource-based movement) and social + > transmission rules (simple t … -5. **Using exploratory modeling to challenge narratives of risk - governance in Mexico City.** +5. **The influence of social and spatial processes on the epidemiology + of environmentally transmitted pathogens in wildlife: implications + for management.** - Eakin H, Bojórquez-Tapia LA, Miquelajauregui Y, Grave I, Aguilar BH, - Janssen MA. + Pandey A, Wojan C, Feuka A, Craft ME, Manlove K, Pepin KM. - Proc Natl Acad Sci U S A. 2024 Sep 3;121(36):e2313191121. doi: - 10.1073/pnas.2313191121. Epub 2024 Aug 28. + Philos Trans R Soc Lond B Biol Sci. 2024 Oct 21;379(1912):20220532. + doi: 10.1098/rstb.2022.0532. Epub 2024 Sep 4. - > We present the results of the project “The Dynamics of - > Multi-Scalar Adaptation in the Megalopolis”, a dynamic, - > exploratory model of socio-hydrological risks in Mexico City that - > was designed to both endogenize and simultaneously challenge the - > dominant narratives that charac … + > A better understanding of how these factors interact to determine + > disease dynamics is required for developing robust surveillance + > and management strategies. Here, we use a simple agent-based model + > where we vary host mobility (spatial), host gregariousness (so … -6. **Predicting population-level impacts of projected climate heating - on a temperate freshwater fish.** +6. **A wrap-around movement path randomization method to distinguish + social and spatial drivers of animal interactions.** - Mintram KS, Brown AR, Maynard SK, Thorbek P, Tyler CR. + Gahm K, Nguyen R, Acácio M, Anglister N, Vaadia G, Spiegel O, + Pinter-Wollman N. - J Fish Biol. 2024 Aug 28. doi: 10.1111/jfb.15889. Online ahead of - print. + Philos Trans R Soc Lond B Biol Sci. 2024 Oct 21;379(1912):20220531. + doi: 10.1098/rstb.2022.0531. Epub 2024 Sep 4. - > To realistically predict the effects of projected climate heating - > on wildlife populations, mechanistic tools are required to - > incorporate the inherent physiological effects of temperature - > changes, as well as the associated effects on food availability - > within and across comparable … + > Here, we update a reference model that detects social attraction + > above the effect of spatial constraints. We explore the use of our + > ‘wrap-around’ method and compare its performance to the previous + > approach using agent-based simulations. The wrap-around method … -7. **Landscape of fear: indirect effects of conflict can account for - large-scale population declines in non-state societies.** +7. **Diverse morphology and motility induced emergent order in + bacterial collectives.** - Kondor D, Bennett JS, Gronenborn D, Turchin P. + Mondal K, Bera P, Ghosh P. - J R Soc Interface. 2024 Aug;21(217):20240210. doi: - 10.1098/rsif.2024.0210. Epub 2024 Aug 28. + J Chem Phys. 2024 Sep 7;161(9):094908. doi: 10.1063/5.0220700. - > This process causes population decline in the abandoned regions - > and increased stress on local resources in better-protected areas - > that are targeted by refugees. By applying analytical and - > computational modelling, we demonstrate that these indirect - > effects of conflict are s … + > In this study, we delve into the dynamics of a mixed bacterial + > population comprising two distinct species with different + > morphology and motility aspects. Employing agent-based modeling + > and computer simulations, we analyze the impacts of size ratios + > and packin … -8. **Hyper-diverse antigenic variation and resilience to - transmission-reducing intervention in falciparum malaria.** +8. **Determinants of successful disease control through voluntary + quarantine dynamics on social networks.** - Zhan Q, He Q, Tiedje KE, Day KP, Pascual M. + Shi S, Wang Z, Chen X, Fu F. - Nat Commun. 2024 Aug 26;15(1):7343. doi: 10.1038/s41467-024-51468-6. + Math Biosci. 2024 Aug 31;377:109288. doi: 10.1016/j.mbs.2024.109288. + Online ahead of print. - > Incomplete immunity relates to the large antigenic variation of - > the parasite, with the major surface antigen of the blood stage of - > infection encoded by the multigene and recombinant family known as - > var. With a stochastic agent-based model, we investigate the … + > To better understand self-motivated health behavior choices under + > these factors, here we incorporate voluntary quarantine into an + > endemic disease model - the susceptible-infected-susceptible (SIS) + > model - and perform comprehensive agent-based simulatio … -9. **Sensor-Based Fuzzy Inference of COVID-19 Transmission Risk in - Cruise Ships.** +9. **Enforced specificity of an animal symbiosis.** - Triantafyllou G, Sovatzidi G, Dimas G, Kalozoumis PG, Drikakis D, - Kokkinakis IW, Markakis IA, Golna C, Iakovidis D. + Wagner JM, Wong JH, Millar JG, Haxhimali E, Bruckner A, Naragon TH, + Boedicker JQ, Parker J. - Stud Health Technol Inform. 2024 Aug 22;316:1817-1821. doi: - 10.3233/SHTI240784. + bioRxiv \[Preprint\]. 2024 Aug 6:2024.08.04.606548. doi: + 10.1101/2024.08.04.606548. - > In contrast to previous approaches, the proposed method considers - > data captured by several sensors and the ship information system, - > according to a recently proposed smart ship design. Evaluation - > with agent-based simulations confirms the effectiveness of the - > proposed … + > The strict fidelity of many such interspecies associations is + > posited to hinge on sensory tuning to host-derived cues, a model + > supported by studies of neural function in host-specific model + > species. …Remarkably, the rove beetle also performs its symbiotic + > behavior … -10. **Integrating mechanism-based T cell phenotypes into a model of - tumor-immune cell interactions.** +10. **A model-based assessment of social isolation practices for + COVID-19 outbreak response in residential care facilities.** - Tangella N, Cess CG, Ildefonso GV, Finley SD. + Zachreson C, Tobin R, Walker C, Conway E, Shearer FM, McVernon J, + Geard N. - APL Bioeng. 2024 Aug 20;8(3):036111. doi: 10.1063/5.0205996. - eCollection 2024 Sep. + BMC Infect Dis. 2024 Aug 29;24(1):880. doi: + 10.1186/s12879-024-09788-x. - > It is difficult to gain mechanistic insights into the effects of - > cell-cell interactions in tumors using a purely experimental - > approach. However, computational modeling enables quantitative - > investigation of the tumor microenvironment, and agent-based - > modeli … + > Such policies are controversial because of their association with + > adverse mental and physical health indicators and there is a lack + > of modelling that assesses their effectiveness. METHODS: In + > consultation with the Australian Government Department of Health + > and Aged Care, w … ## Code of Conduct