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It performs a search on PubMed looking for the <a
href="https://pubmed.ncbi.nlm.nih.gov/?term=agent-based+model&amp;sort=date"
target="_blank">latest papers about Agent-Based Models</a>. The last
update was on 2023-09-17 00:35:57.
update was on 2023-09-24 00:36:15.

<div class="cell">

</div>

1. **Evolution of HIV virulence in response to disease-modifying
vaccines: A modeling study.**
1. **Study of vascular sclerosing agent based on the dual mechanism of
vascular endothelial cell damage-plasmin system inhibition.**

Reid MC, Mittler JE, Murphy JT, Stansfield SE, Goodreau SM,
Abernethy N, Herbeck JT.
Ma J, Chen Y, Zhang K, Yang T, Xie H, Yang X, Ding P.

Vaccine. 2023 Sep 13:S0264-410X(23)01027-7. doi:
10.1016/j.vaccine.2023.08.071. Online ahead of print.
Biochem Biophys Res Commun. 2023 Sep 15;680:135-140. doi:
10.1016/j.bbrc.2023.09.035. Online ahead of print.

> We explored the potential for such virulence evolution with a
> disease-modifying HIV-1 vaccine in an agent-based stochastic
> epidemic model of HIV in United States men who have sex with men
> (MSM). In the model, vaccinated agents received no protection ag …
> In this study, we have developed a novel cationic surfactant-based
> sclerosing agent (POL-TA) by conjugating the plasmin inhibitor
> tranexamic acid (TA) with a nonionic surfactant polidocanol (POL)
> through an ester bond. …The inhibitory effects of POL-TA on the
> plas …
2. **Three-state opinion model with mobile agents.**
2. **Generalized morality culturally evolves as an adaptive heuristic
in large social networks.**

Ferri I, Gaya-Àvila A, Díaz-Guilera A.
Jackson JC, Halberstadt J, Takezawa M, Liew K, Smith K, Apicella C,
Gray K.

Chaos. 2023 Sep 1;33(9):093121. doi: 10.1063/5.0152674.
J Pers Soc Psychol. 2023 Sep 21. doi: 10.1037/pspa0000358. Online
ahead of print.

> We study an agent-based opinion model with two extreme (opposite)
> opinion states and a neutral intermediate one. We adjust the
> relative degree of conviction between extremists and neutrals
> through a dimensionless parameter called the “neutrality
> parameter” to …
> Why do we even use words like “moral” and “immoral”? We explore
> these questions with a new model of how people perceive moral
> character. We propose that people vary in the extent to which they
> perceive moral character as “localized” (varying along many
> contextually embedde …
3. **Deconstructing the effects of stochasticity on transmission of
hospital-acquired infections in ICUs.**
3. **Diverse mutant selection windows shape spatial heterogeneity in
evolving populations.**

Haghpanah F, Lin G, Klein E; CDC MInD-Healthcare Program.
King ES, Pierce B, Hinczewski M, Scott JG.

R Soc Open Sci. 2023 Sep 13;10(9):230277. doi: 10.1098/rsos.230277.
eCollection 2023 Sep.
bioRxiv. 2023 Sep 6:2023.03.09.531899. doi:
10.1101/2023.03.09.531899. Preprint.

> In this study, we investigated the impact of uncertainty
> (epistemic and aleatory) on nosocomial transmission of HAIs by
> evaluating the effects of stochasticity on the detectability of
> seasonality of admission prevalence. For doing so, we developed an
> agent-based …
> In this work, we show how N -allele fitness seascapes allow for N
> 2 (N- 1) unique MSW comparisons. In spatial drug diffusion models,
> we demonstrate how fitness seascapes reveal spatially
> heterogeneous MSWs, extending the MSW model to more accurately
> reflect the sele …
4. **Simulating the impact of particulate matter exposure on
health-related behaviour: A comparative study of stochastic
modelling and personal monitoring data.**
4. **The impact of preventive treatment for multidrug- and
rifampin-resistant tuberculosis exceeds trial-based estimates.**

Novak R, Robinson JA, Kanduč T, Sarigiannis D, Kocman D.
Kasaie P, Pennington J, Gupta A, Dowdy DW, Kendall EA.

Health Place. 2023 Sep 12;83:103111. doi:
10.1016/j.healthplace.2023.103111. Online ahead of print.
Clin Infect Dis. 2023 Sep 19:ciad557. doi: 10.1093/cid/ciad557.
Online ahead of print.

> While low-cost personal monitors have some drawbacks, recent
> developments have shown that they can provide fairly accurate and
> fit-for-purpose data. Comparing a stochastic, i.e., agent-based
> model (ABM), with environmental, biometric and activity data,
> collec …
> The potential benefits of delivering TPT to MDR/RR-TB contacts
> extend beyond the outcomes that clinical trials can measure.
> METHODS: We developed an agent-based, household-structured TB and
> MDR/RR-TB transmission model, calibrated to an illustrative
> setting i …
5. **‘Evolutionary poker’: an agent-based model of interactome
emergence and epistasis tested against Lenski’s long-term E. coli
experiments.**
5. **Policy evaluation of economic - environmental tradeoffs in
regulating industrial water use: An agent-based model.**

Root-Bernstein RS, Bernstein MI.
Sun D, Zhang M, Jung D.

J Physiol. 2023 Sep 14. doi: 10.1113/JP284421. Online ahead of
print.
J Environ Manage. 2023 Sep 16;346:118988. doi:
10.1016/j.jenvman.2023.118988. Online ahead of print.

> A simple agent-based model is presented that produces results
> matching the experimental data found by Lenski’s group for 50,000
> generations of Escherichia coli bacteria under continuous
> selective pressure. Although various mathematical models ha …
> Therefore, scientifically regulating the water consumption and
> sewage discharge of industrial enterprises can effectively
> alleviate water scarcity and pollution problems. By establishing a
> multi-agent model, this study simulates the water use behavior of
> industrial …
6. **Elongating, entwining, and dragging: mechanism for adaptive
locomotion of tubificine worm blobs in a confined environment.**
6. **Minority-group incubators and majority-group reservoirs support
the diffusion of climate change adaptations.**

Mikami T, Wakita D, Kobayashi R, Ishiguro A, Kano T.
Turner MA, Singleton AL, Harris MJ, Harryman I, Lopez CA, Arthur RF,
Muraida C, Jones JH.

Front Neurorobot. 2023 Aug 29;17:1207374. doi:
10.3389/fnbot.2023.1207374. eCollection 2023.
Philos Trans R Soc Lond B Biol Sci. 2023 Nov 6;378(1889):20220401.
doi: 10.1098/rstb.2022.0401. Epub 2023 Sep 18.

> We found the blob deformed and passed through a narrow passage
> using environmental heterogeneities. Based on these behavioral
> findings, we constructed a simple two-dimensional agent-based
> model wherein the flexible body of a worm was described as a cro …
> Current theory suggests that the heterogeneity of metapopulation
> structure can help adaptations diffuse throughout a population. In
> this paper, we develop an agent-based model of the spread of
> adaptations in populations with minority-majority metapopulation s
> …
7. **Systems-Level Evaluation of Safe Routes to School Policies in El
Paso, Texas: A Modeling Study on Health and Economic Outcomes.**
7. **The impacts of climate change, energy policy and traditional
ecological practices on future firewood availability for Diné
(Navajo) People.**

Garney W, Panjwani S, Curran L, Enderle J, King L, O’Neil D, Li Y.
Magargal K, Wilson K, Chee S, Campbell MJ, Bailey V, Dennison PE,
Anderegg WRL, Cachelin A, Brewer S, Codding BF.

Fam Community Health. 2023 Oct-Dec 01;46(Suppl 1):S22-S29. doi:
10.1097/FCH.0000000000000374.
Philos Trans R Soc Lond B Biol Sci. 2023 Nov 6;378(1889):20220394.
doi: 10.1098/rstb.2022.0394. Epub 2023 Sep 18.

> This study used systems science methods to predict long-term
> health and economic impact of SRTS among school-age children in El
> Paso County, Texas. We developed an agent-based model containing 2
> modules: the pedestrian injury module and the CVD module. …The …
> However, there are two acute problems: first, climate
> change-induced drought will diminish local sources of firewood;
> second, policies aimed at reducing reliance on
> greenhouse-gas-emitting energy sources may limit alternatives like
> coal for home use, thereby increasing firewood d …
8. **Semiparametric inference of effective reproduction number dynamics
from wastewater pathogen surveillance data.**
8. **Evolution of HIV virulence in response to disease-modifying
vaccines: A modeling study.**

Goldstein IH, Parker DM, Jiang S, Minin VM.
Reid MC, Mittler JE, Murphy JT, Stansfield SE, Goodreau SM,
Abernethy N, Herbeck JT.

ArXiv. 2023 Aug 31:arXiv:2308.15770v2. Preprint.
Vaccine. 2023 Sep 13:S0264-410X(23)01027-7. doi:
10.1016/j.vaccine.2023.08.071. Online ahead of print.

> As a byproduct of our primary goal, we also produce a new model
> for estimating the effective reproduction number from case data
> using the same framework. We test this modeling framework in an
> agent-based simulation study with a realistic data generatin …
> We explored the potential for such virulence evolution with a
> disease-modifying HIV-1 vaccine in an agent-based stochastic
> epidemic model of HIV in United States men who have sex with men
> (MSM). In the model, vaccinated agents received no protection ag …
9. **Circulation of Respiratory Viruses in the City: Towards an
Agent-Based Ecosystem model.**
9. **Three-state opinion model with mobile agents.**

Vlad AI, Romanyukha AA, Sannikova TE.
Ferri I, Gaya-Àvila A, Díaz-Guilera A.

Bull Math Biol. 2023 Sep 10;85(10):100. doi:
10.1007/s11538-023-01203-x.
Chaos. 2023 Sep 1;33(9):093121. doi: 10.1063/5.0152674.

> Mathematical models play an important role in management of
> outbreaks of acute respiratory infections (ARI). …These viruses
> have been studied in detail, including the course of infection and
> immune defense mechanisms. We developed an agent-based model …
> We study an agent-based opinion model with two extreme (opposite)
> opinion states and a neutral intermediate one. We adjust the
> relative degree of conviction between extremists and neutrals
> through a dimensionless parameter called the “neutrality
> parameter” to …
10. **Synthetic symmetry breaking and programmable multicellular
structure formation.**
10. **Deconstructing the effects of stochasticity on transmission of
hospital-acquired infections in ICUs.**

Wauford N, Patel A, Tordoff J, Enghuus C, Jin A, Toppen J, Kemp ML,
Weiss R.
Haghpanah F, Lin G, Klein E; CDC MInD-Healthcare Program.

Cell Syst. 2023 Sep 8:S2405-4712(23)00216-8. doi:
10.1016/j.cels.2023.08.001. Online ahead of print.
R Soc Open Sci. 2023 Sep 13;10(9):230277. doi: 10.1098/rsos.230277.
eCollection 2023 Sep.

> We use this switch to control the cell-cell adhesion properties of
> cells committed to each fate.(10)(,)(11) We generate a wide
> variety of 3D morphologies from a monoclonal population and
> develop a computational model showing high concordance with
> experimental results, yiel …
> In this study, we investigated the impact of uncertainty
> (epistemic and aleatory) on nosocomial transmission of HAIs by
> evaluating the effects of stochasticity on the detectability of
> seasonality of admission prevalence. For doing so, we developed an
> agent-based …
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