DESCRIPTION

Package: biofiles
Type: Package
Title: An Interface for GenBank/GenPept Flat Files
Version: 1.0.0.9000
Author: Gerhard Schöfl [aut, cre]
Maintainer: Gerhard Schöfl <gerhard.schofl@gmail.com>
Description: Parse GenBank/GenPept records <https://www.ncbi.nlm.nih.gov/Sitemap/samplerecord.html>
    into native R objects to easily access and manipulate the sequence and annotation information.
Depends:
    R (>= 3.3.1),
    Rcpp (>= 0.11.0)
LinkingTo: Rcpp (>= 0.11.0)
Imports:
    assertthat,
    BiocGenerics,
    Biostrings,
    foreach,
    GenomeInfoDb,
    GenomicRanges,
    IRanges,
    iterators,
    methods,
    parallel,
    RCurl,
    reutils,
    stats,
    S4Vectors,
    XVector
Suggests:
    doParallel,
    testthat,
    BiocStyle,
    knitr,
    covr
License: MIT + file LICENSE
Encoding: UTF-8
URL: https://github.com/gschofl/biofiles
BugReports: https://github.com/gschofl/biofiles/issues
Collate:
    'RcppExports.R'
    'utils.R'
    'all-generics.R'
    'biofiles-package.R'
    'filter.R'
    'flanking.R'
    'gbHeader-class.R'
    'gbLocation-class.R'
    'gbFeature-class.R'
    'gbFeatureTable-class.R'
    'gbRecord-class.R'
    'gbRecordList-class.R'
    'genome-record-from-ncbi.R'
    'make-ranges.R'
    'misc-functions.R'
    'parser-general.R'
    'parser-embl.R'
    'parser-gbk.R'
    'select.R'
    'shift.R'
    'write-feature-table.R'
    'write-genbank.R'
    'zzz.R'
VignetteBuilder: knitr
RoxygenNote: 7.1.1