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Fix FAST5 errors with Guppy and Dorado #48

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jonperdomo opened this issue Apr 26, 2024 · 0 comments · Fixed by #49
Closed

Fix FAST5 errors with Guppy and Dorado #48

jonperdomo opened this issue Apr 26, 2024 · 0 comments · Fixed by #49
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@jonperdomo
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When testing fast5 files, it works well for a small Albacore fast5 file (300 Kb), while it failed for a Dorado-generated fast5 file (https://github.com/nanoporetech/dorado/blob/master/tests/data/fast5/single_read.fast5) and a Guppy-generated fast5 (it threw segmentation fault when running large guppy fast5).

@jonperdomo jonperdomo added the bug Something isn't working label Apr 26, 2024
@jonperdomo jonperdomo self-assigned this Apr 26, 2024
@jonperdomo jonperdomo linked a pull request Apr 29, 2024 that will close this issue
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