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Unknown error #65

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carordc opened this issue Aug 14, 2024 · 0 comments
Open

Unknown error #65

carordc opened this issue Aug 14, 2024 · 0 comments

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@carordc
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carordc commented Aug 14, 2024

Hello,

I don't know if you guys are still working on FIGARO, but I'm very interested on working with this tool on my data. I got the following issue, and I will leave it here to see if someone can help me :)

python3 /home/caio/figaro/figaro/figaro.py -i /home/caio/out_cutadapt -o /home/caio/out -a 464 -f 17 -r 21
Forward read length: 248
Reverse read length: 245
Combined read lengths are less than the required combined length.
Combined read lengths are less than the required combined length.
Traceback (most recent call last):
File "/home/caio/figaro/figaro/figaro.py", line 406, in
main()
File "/home/caio/figaro/figaro/figaro.py", line 380, in main
trimParameterPrediction.performAnalysisLite(
File "/home/caio/figaro/figaro/trimParameterPrediction.py", line 780, in performAnalysisLite
resultTable = runTrimParameterTestLite(
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/caio/figaro/figaro/trimParameterPrediction.py", line 552, in runTrimParameterTestLite
forwardExpectedErrors = forwardExpectedErrorMatrix[
^^^^^^^^^^^^^^^^^^^^^^^^^^^
IndexError: index -1 is out of bounds for axis 0 with size 0

Thanks! Cheers

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