diff --git a/.github/workflows/docs.yml b/.github/workflows/docs.yml index dc2d5595..5485d7b3 100644 --- a/.github/workflows/docs.yml +++ b/.github/workflows/docs.yml @@ -13,7 +13,7 @@ jobs: fail-fast: false matrix: os: [ubuntu-latest] - python-version: ["3.9"] + python-version: ["3.11"] env: FC: gfortran @@ -31,7 +31,7 @@ jobs: run: | pip install build python -m build . - pip install -r docs/requirements.txt + pip install .[doc] - name: Check documentation build run: sphinx-build -E -b html docs dist/docs diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml index 8b529fbb..c6e447d3 100644 --- a/.github/workflows/main.yml +++ b/.github/workflows/main.yml @@ -12,10 +12,27 @@ jobs: strategy: fail-fast: false matrix: - os: [ubuntu-latest, macos-latest, windows-latest] - python-version: ["3.7", "3.8", "3.9", "3.10"] + os: ["ubuntu-latest", "windows-latest"] + python-version: ["3.9", "3.10", "3.11", "3.12"] + numpy-ver: ["latest"] + test_config: ["latest"] + include: + # Support different GA Mac environmnets + - python-version: "3.9" + os: "macos-13" + - python-version: "3.10" + os: "macos-13" + - python-version: "3.11" + os: "macos-latest" + - python-version: "3.12" + os: "macos-latest" + # NEP29 compliance settings + - python-version: "3.10" + numpy-ver: "1.25" + os: "ubuntu-latest" + test_config: "NEP29" - name: Python ${{ matrix.python-version }} on ${{ matrix.os }} + name: Python ${{ matrix.python-version }} on ${{ matrix.os }} with Numpy ${{ matrix.numpy-ver }} runs-on: ${{ matrix.os }} steps: - uses: actions/checkout@v3 @@ -25,17 +42,22 @@ jobs: python-version: ${{ matrix.python-version }} architecture: 'x64' + - name: Install NEP29 dependencies + if: ${{ matrix.test_config == 'NEP29'}} + run: | + pip install numpy==${{ matrix.numpy-ver }} + - name: Install standard and test dependencies - run: pip install build coverage coveralls flake8 numpy pytest + run: pip install --upgrade-strategy only-if-needed .[test] - name: Install on Linux/Windows - if: ${{ matrix.os != 'macos-latest' }} + if: ${{ matrix.os == 'ubuntu-latest' || matrix.os == 'windows-latest'}} run: | python -m build . pip install -e . - name: Install on MacOS - if: ${{ matrix.os == 'macos-latest' }} + if: ${{ matrix.os == 'macos-latest' || matrix.os == 'macos-13' }} run: | brew reinstall gcc python -m build . @@ -48,18 +70,32 @@ jobs: run: flake8 . --count --exit-zero --max-complexity=10 --statistics - name: Run unit and integration tests - run: coverage run --rcfile=setup.cfg -m pytest + run: pytest --cov=aacgmv2 --cov-report xml - - name: Publish results to coveralls upon success - env: - GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} - run: | - coverage combine - coverage report -m - coveralls --rcfile=setup.cfg --service=github + - name: Coveralls Parallel + uses: coverallsapp/github-action@v2 + with: + github-token: ${{ secrets.GITHUB_TOKEN }} + flag-name: run=${{ join(matrix.*, '-') }} + parallel: true + format: cobertura + debug: true - name: Upload wheels uses: actions/upload-artifact@v3 with: path: dist/*.whl if-no-files-found: warn + + finish: + name: Finish Coverage Analysis + needs: build + if: ${{ always() }} + runs-on: ubuntu-latest + steps: + - name: Coveralls Finished + uses: coverallsapp/github-action@v2 + with: + github-token: ${{ secrets.GITHUB_TOKEN }} + parallel-finished: true + diff --git a/.readthedocs.yml b/.readthedocs.yml new file mode 100644 index 00000000..9c3316d6 --- /dev/null +++ b/.readthedocs.yml @@ -0,0 +1,25 @@ +# .readthedocs.yml +# Read the Docs configuration file +# See https://docs.readthedocs.io/en/stable/config-file/v2.html for details + +# Required +version: 2 + +# Set the version of Python and other tools you might need +build: + os: ubuntu-22.04 + tools: + python: "3.11" + +# Build documentation in the docs/ directory with Sphinx +sphinx: + configuration: docs/conf.py + + +# Optionally declare the Python requirements required to build your docs +python: + install: + - method: pip + path: . + extra_requirements: + - doc diff --git a/CHANGELOG.rst b/CHANGELOG.rst index f45772a3..39f8cd0d 100644 --- a/CHANGELOG.rst +++ b/CHANGELOG.rst @@ -2,6 +2,17 @@ Changelog ========= +2.7.0 (2024-12-31) +------------------ + +* Updated C source code to version 2.7 +* Updated coefficients for IGRF-14 +* Added yaml for ReadTheDocs and moved requirements to pyproject.toml +* Cycled supported Python versions +* Updated GitHub Actions CI to use new Coveralls integration +* Updated documentation to include instructions for future IGRF and C updates +* Removed the deprecated function module + 2.6.3 (2023-02-08) ------------------ diff --git a/CODE_OF_CONDUCT.md b/CODE_OF_CONDUCT.md index a3a6f416..4e3285c5 100644 --- a/CODE_OF_CONDUCT.md +++ b/CODE_OF_CONDUCT.md @@ -55,10 +55,10 @@ further defined and clarified by project maintainers. ## Enforcement Instances of abusive, harassing, or otherwise unacceptable behavior may be -reported by contacting the project head at angeline.burrell@nrl.navy.mil. All -complaints will be reviewed and investigated and will result in a response that -is deemed necessary and appropriate to the circumstances. The project team is -obligated to maintain confidentiality with regard to the reporter of an +reported by contacting the project head at angeline.g.burrell.civ@us.navy.mil. +All complaints will be reviewed and investigated and will result in a response +that is deemed necessary and appropriate to the circumstances. The project team +is obligated to maintain confidentiality with regard to the reporter of an incident. Further details of specific enforcement policies may be posted separately. diff --git a/README.rst b/README.rst index bfaa5b70..240ee478 100644 --- a/README.rst +++ b/README.rst @@ -5,9 +5,9 @@ Overview |docs| |version| |doi| This is a Python wrapper for the `AACGM-v2 C library -`_, which allows +`_, which allows converting between geographic and magnetic coordinates. The currently included -version of the C library is 2.6. The package is free software +version of the C library is 2.7. The package is free software (MIT license). When referencing this package, please cite both the package DOI and the AACGM-v2 journal article: @@ -55,7 +55,7 @@ Documentation https://aacgmv2.readthedocs.io/en/latest/ -http://superdarn.thayer.dartmouth.edu/aacgm.html +https://superdarn.thayer.dartmouth.edu/aacgm.html Badges ====== @@ -93,7 +93,7 @@ Badges :target: https://app.codacy.com/gh/aburrell/aacgmv2?utm_source=github.com&utm_medium=referral&utm_content=aburrell/aacgmv2&utm_campaign=Badge_Grade .. |codeclimate| image:: https://api.codeclimate.com/v1/badges/91f5a91bf3d9ba90cb57/maintainability.svg - :target: https://codeclimate.com/github/aburrell/aacgmv2 + :target: https://codeclimate.com/github/aburrell/aacgmv2/builds :alt: CodeClimate Quality Status .. |version| image:: https://img.shields.io/pypi/v/aacgmv2.svg?style=flat diff --git a/aacgmv2/__init__.py b/aacgmv2/__init__.py index 5bc79706..196c802d 100644 --- a/aacgmv2/__init__.py +++ b/aacgmv2/__init__.py @@ -21,6 +21,8 @@ """ # Imports +from importlib import metadata +from importlib import resources import logging import os as _os from sys import stderr @@ -33,11 +35,10 @@ from aacgmv2.wrapper import get_aacgm_coord # noqa F401 from aacgmv2.wrapper import get_aacgm_coord_arr # noqa F401 from aacgmv2 import _aacgmv2 # noqa F401 -from aacgmv2 import deprecated # noqa F401 from aacgmv2 import utils # noqa F401 # Define global variables -__version__ = "2.6.3" +__version__ = metadata.version('aacgmv2') # Define a logger object to allow easier log handling logger = logging.getLogger('aacgmv2_logger') @@ -47,10 +48,14 @@ high_alt_trace = 6378.0 # 1 RE, these are ionospheric coordinates # Path and filename prefix for the IGRF coefficients -AACGM_v2_DAT_PREFIX = _os.path.join(_os.path.realpath( - _os.path.dirname(__file__)), 'aacgm_coeffs', 'aacgm_coeffs-13-') -IGRF_COEFFS = _os.path.join(_os.path.realpath(_os.path.dirname(__file__)), - 'magmodel_1590-2020.txt') +AACGM_v2_DAT_PREFIX = _os.path.join( + _os.path.split(str(resources.path(__package__, + '__init__.py').__enter__()))[0], + 'aacgm_coeffs', 'aacgm_coeffs-14-') +IGRF_COEFFS = _os.path.join( + _os.path.split(str(resources.path(__package__, + '__init__.py').__enter__()))[0], + 'magmodel_1590-2025.txt') # If not defined, set the IGRF and AACGM environment variables __reset_warn__ = False diff --git a/aacgmv2/__main__.py b/aacgmv2/__main__.py index 3f7c504f..7ecd4416 100644 --- a/aacgmv2/__main__.py +++ b/aacgmv2/__main__.py @@ -17,7 +17,6 @@ def main(): """Entry point for the script.""" - desc = 'Converts between geographical coordinates, AACGM-v2, and MLT' parser = argparse.ArgumentParser(description=desc) diff --git a/aacgmv2/aacgm_coeffs/aacgm_coeffs-13-2020.asc b/aacgmv2/aacgm_coeffs/aacgm_coeffs-13-2020.asc deleted file mode 100644 index 792525e5..00000000 --- a/aacgmv2/aacgm_coeffs/aacgm_coeffs-13-2020.asc +++ /dev/null @@ -1,639 +0,0 @@ - 0.104527 2.68921 -0.338267 -0.875406 -0.00548887 -0.0218110 - 0.0886074 -0.0612223 0.0113187 0.00381209 0.0178488 -0.0495889 - 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-0.000131065 + 0.000586834 0.000164342 0.000828319 -0.000833872 -0.000994207 0.000499473 + -0.000434965 0.00174177 0.00169164 0.00309330 -0.000978647 -0.000888258 + 0.000468016 -0.000709076 0.000513462 -0.000478162 -7.33624e-05 -0.000279261 + 0.000795571 -5.15002e-05 0.000121013 -0.000448324 -0.000518014 1.32828e-05 + -0.000781814 8.00909e-05 -0.00103377 0.000779195 -0.00360463 -0.000283120 + -0.00279702 diff --git a/aacgmv2/deprecated.py b/aacgmv2/deprecated.py deleted file mode 100644 index dfc0fac5..00000000 --- a/aacgmv2/deprecated.py +++ /dev/null @@ -1,44 +0,0 @@ -# Copyright (C) 2019 NRL -# Author: Angeline Burrell -# Disclaimer: This code is under the MIT license, whose details can be found at -# the root in the LICENSE file -# -# -*- coding: utf-8 -*- -"""Pythonic wrappers for formerly deprecated AACGM-V2 C functions that were -moved to the default wrapper in version 2.6.1 - -""" - -import warnings -import aacgmv2 - -dep_str = "".join(["Routine no longer deprecated, and so has been moved to ", - "new utils module. Duplicate routine in deprecated module", - " will be removed in version 2.7.0"]) - - -def subsol(year, doy, utime): - """Deprecated call to aacgmv2.utils.subsol.""" - warnings.warn(dep_str, category=FutureWarning) - - sbsllon, sbsllat = aacgmv2.utils.subsol(year, doy, utime) - - return sbsllon, sbsllat - - -def gc2gd_lat(gc_lat): - """Deprecated call to aacgmv2.utils.gc2gd_lat.""" - warnings.warn(dep_str, category=FutureWarning) - - gd_lat = aacgmv2.utils.gc2gd_lat(gc_lat) - - return gd_lat - - -def igrf_dipole_axis(date): - """Deprecated call to aacgmv2.utils.igrf_dipole_axis.""" - warnings.warn(dep_str, category=FutureWarning) - - m_0 = aacgmv2.utils.igrf_dipole_axis(date) - - return m_0 diff --git a/aacgmv2/igrf13coeffs.txt b/aacgmv2/igrf14coeffs.txt similarity index 88% rename from aacgmv2/igrf13coeffs.txt rename to aacgmv2/igrf14coeffs.txt index 9b362e06..13e71226 100644 --- a/aacgmv2/igrf13coeffs.txt +++ b/aacgmv2/igrf14coeffs.txt @@ -1,199 +1,199 @@ -# 13th Generation International Geomagnetic Reference Field Schmidt semi-normalised spherical harmonic coefficients, degree n=1,13 +# 14th Generation International Geomagnetic Reference Field Schmidt semi-normalised spherical harmonic coefficients, degree n=1,13 # in units nanoTesla for IGRF and definitive DGRF main-field models (degree n=1,8 nanoTesla/year for secular variation (SV)) -c/s deg ord IGRF IGRF IGRF IGRF IGRF IGRF IGRF IGRF IGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF IGRF SV -g/h n m 1900.0 1905.0 1910.0 1915.0 1920.0 1925.0 1930.0 1935.0 1940.0 1945.0 1950.0 1955.0 1960.0 1965.0 1970.0 1975.0 1980.0 1985.0 1990.0 1995.0 2000.0 2005.0 2010.0 2015.0 2020.0 2020-25 -g 1 0 -31543 -31464 -31354 -31212 -31060 -30926 -30805 -30715 -30654 -30594 -30554 -30500 -30421 -30334 -30220 -30100 -29992 -29873 -29775 -29692 -29619.4 -29554.63 -29496.57 -29441.46 -29404.8 5.7 -g 1 1 -2298 -2298 -2297 -2306 -2317 -2318 -2316 -2306 -2292 -2285 -2250 -2215 -2169 -2119 -2068 -2013 -1956 -1905 -1848 -1784 -1728.2 -1669.05 -1586.42 -1501.77 -1450.9 7.4 -h 1 1 5922 5909 5898 5875 5845 5817 5808 5812 5821 5810 5815 5820 5791 5776 5737 5675 5604 5500 5406 5306 5186.1 5077.99 4944.26 4795.99 4652.5 -25.9 -g 2 0 -677 -728 -769 -802 -839 -893 -951 -1018 -1106 -1244 -1341 -1440 -1555 -1662 -1781 -1902 -1997 -2072 -2131 -2200 -2267.7 -2337.24 -2396.06 -2445.88 -2499.6 -11.0 -g 2 1 2905 2928 2948 2956 2959 2969 2980 2984 2981 2990 2998 3003 3002 2997 3000 3010 3027 3044 3059 3070 3068.4 3047.69 3026.34 3012.20 2982.0 -7.0 -h 2 1 -1061 -1086 -1128 -1191 -1259 -1334 -1424 -1520 -1614 -1702 -1810 -1898 -1967 -2016 -2047 -2067 -2129 -2197 -2279 -2366 -2481.6 -2594.50 -2708.54 -2845.41 -2991.6 -30.2 -g 2 2 924 1041 1176 1309 1407 1471 1517 1550 1566 1578 1576 1581 1590 1594 1611 1632 1663 1687 1686 1681 1670.9 1657.76 1668.17 1676.35 1677.0 -2.1 -h 2 2 1121 1065 1000 917 823 728 644 586 528 477 381 291 206 114 25 -68 -200 -306 -373 -413 -458.0 -515.43 -575.73 -642.17 -734.6 -22.4 -g 3 0 1022 1037 1058 1084 1111 1140 1172 1206 1240 1282 1297 1302 1302 1297 1287 1276 1281 1296 1314 1335 1339.6 1336.30 1339.85 1350.33 1363.2 2.2 -g 3 1 -1469 -1494 -1524 -1559 -1600 -1645 -1692 -1740 -1790 -1834 -1889 -1944 -1992 -2038 -2091 -2144 -2180 -2208 -2239 -2267 -2288.0 -2305.83 -2326.54 -2352.26 -2381.2 -5.9 -h 3 1 -330 -357 -389 -421 -445 -462 -480 -494 -499 -499 -476 -462 -414 -404 -366 -333 -336 -310 -284 -262 -227.6 -198.86 -160.40 -115.29 -82.1 6.0 -g 3 2 1256 1239 1223 1212 1205 1202 1205 1215 1232 1255 1274 1288 1289 1292 1278 1260 1251 1247 1248 1249 1252.1 1246.39 1232.10 1225.85 1236.2 3.1 -h 3 2 3 34 62 84 103 119 133 146 163 186 206 216 224 240 251 262 271 284 293 302 293.4 269.72 251.75 245.04 241.9 -1.1 -g 3 3 572 635 705 778 839 881 907 918 916 913 896 882 878 856 838 830 833 829 802 759 714.5 672.51 633.73 581.69 525.7 -12.0 -h 3 3 523 480 425 360 293 229 166 101 43 -11 -46 -83 -130 -165 -196 -223 -252 -297 -352 -427 -491.1 -524.72 -537.03 -538.70 -543.4 0.5 -g 4 0 876 880 884 887 889 891 896 903 914 944 954 958 957 957 952 946 938 936 939 940 932.3 920.55 912.66 907.42 903.0 -1.2 -g 4 1 628 643 660 678 695 711 727 744 762 776 792 796 800 804 800 791 782 780 780 780 786.8 797.96 808.97 813.68 809.5 -1.6 -h 4 1 195 203 211 218 220 216 205 188 169 144 136 133 135 148 167 191 212 232 247 262 272.6 282.07 286.48 283.54 281.9 -0.1 -g 4 2 660 653 644 631 616 601 584 565 550 544 528 510 504 479 461 438 398 361 325 290 250.0 210.65 166.58 120.49 86.3 -5.9 -h 4 2 -69 -77 -90 -109 -134 -163 -195 -226 -252 -276 -278 -274 -278 -269 -266 -265 -257 -249 -240 -236 -231.9 -225.23 -211.03 -188.43 -158.4 6.5 -g 4 3 -361 -380 -400 -416 -424 -426 -422 -415 -405 -421 -408 -397 -394 -390 -395 -405 -419 -424 -423 -418 -403.0 -379.86 -356.83 -334.85 -309.4 5.2 -h 4 3 -210 -201 -189 -173 -153 -130 -109 -90 -72 -55 -37 -23 3 13 26 39 53 69 84 97 119.8 145.15 164.46 180.95 199.7 3.6 -g 4 4 134 146 160 178 199 217 234 249 265 304 303 290 269 252 234 216 199 170 141 122 111.3 100.00 89.40 70.38 48.0 -5.1 -h 4 4 -75 -65 -55 -51 -57 -70 -90 -114 -141 -178 -210 -230 -255 -269 -279 -288 -297 -297 -299 -306 -303.8 -305.36 -309.72 -329.23 -349.7 -5.0 -g 5 0 -184 -192 -201 -211 -221 -230 -237 -241 -241 -253 -240 -229 -222 -219 -216 -218 -218 -214 -214 -214 -218.8 -227.00 -230.87 -232.91 -234.3 -0.3 -g 5 1 328 328 327 327 326 326 327 329 334 346 349 360 362 358 359 356 357 355 353 352 351.4 354.41 357.29 360.14 363.2 0.5 -h 5 1 -210 -193 -172 -148 -122 -96 -72 -51 -33 -12 3 15 16 19 26 31 46 47 46 46 43.8 42.72 44.58 46.98 47.7 0.0 -g 5 2 264 259 253 245 236 226 218 211 208 194 211 230 242 254 262 264 261 253 245 235 222.3 208.95 200.26 192.35 187.8 -0.6 -h 5 2 53 56 57 58 58 58 60 64 71 95 103 110 125 128 139 148 150 150 154 165 171.9 180.25 189.01 196.98 208.3 2.5 -g 5 3 5 -1 -9 -16 -23 -28 -32 -33 -33 -20 -20 -23 -26 -31 -42 -59 -74 -93 -109 -118 -130.4 -136.54 -141.05 -140.94 -140.7 0.2 -h 5 3 -33 -32 -33 -34 -38 -44 -53 -64 -75 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-0.79 -0.71 -0.60 -0.5 0.0 diff --git a/aacgmv2/magmodel_1590-2020.txt b/aacgmv2/magmodel_1590-2025.txt similarity index 89% rename from aacgmv2/magmodel_1590-2020.txt rename to aacgmv2/magmodel_1590-2025.txt index 94cfa7b9..53b4efbb 100644 --- a/aacgmv2/magmodel_1590-2020.txt +++ b/aacgmv2/magmodel_1590-2025.txt @@ -1,199 +1,199 @@ -# scaled GUFM1 model in order to get agreement with IGRF model (test done over the period 1900-1920)# 13th Generation International Geomagnetic Reference Field Schmidt semi-normalised spherical harmonic coefficients, degree n=1,13 +# scaled GUFM1 model in order to get agreement with IGRF model (test done over the period 1900-1920)# 14th Generation International Geomagnetic Reference Field Schmidt semi-normalised spherical harmonic coefficients, degree n=1,13 # semi-normalised spherical harmonic coefficients, degree n=1,14, in units nanoTesla # in units nanoTesla for IGRF and definitive DGRF main-field models (degree n=1,8 nanoTesla/year for secular variation (SV)) -c/s d o GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 GUFM1 IGRF IGRF IGRF IGRF IGRF IGRF IGRF IGRF IGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF DGRF IGRF SV -g/h n m 1590.0 1595.0 1600.0 1605.0 1610.0 1615.0 1620.0 1625.0 1630.0 1635.0 1640.0 1645.0 1650.0 1655.0 1660.0 1665.0 1670.0 1675.0 1680.0 1685.0 1690.0 1695.0 1700.0 1705.0 1710.0 1715.0 1720.0 1725.0 1730.0 1735.0 1740.0 1745.0 1750.0 1755.0 1760.0 1765.0 1770.0 1775.0 1780.0 1785.0 1790.0 1795.0 1800.0 1805.0 1810.0 1815.0 1820.0 1825.0 1830.0 1835.0 1840.0 1845.0 1850.0 1855.0 1860.0 1865.0 1870.0 1875.0 1880.0 1885.0 1890.0 1895.0 1900.0 1905.0 1910.0 1915.0 1920.0 1925.0 1930.0 1935.0 1940.0 1945.0 1950.0 1955.0 1960.0 1965.0 1970.0 1975.0 1980.0 1985.0 1990.0 1995.0 2000.0 2005.0 2010.0 2015.0 2020.0 2020-25 -g 1 0 -36069 -35993 -35916 -35839 -35762 -35686 -35609 -35532 -35456 -35379 -35303 -35226 -35150 -35073 -34997 -34920 -34844 -34768 -34691 -34615 -34538 -34462 -34386 -34310 -34234 -34157 -34081 -34005 -33929 -33853 -33777 -33701 -33625 -33549 -33474 -33398 -33322 -33246 -33171 -33095 -33019 -32944 -32868 -32793 -32717 -32642 -32566 -32491 -32415 -32339 -32263 -32211 -32196 -32187 -32166 -32114 -32043 -31956 -31857 -31760 -31672 -31606 -31543 -31464 -31354 -31212 -31060 -30926 -30805 -30715 -30654 -30594 -30554 -30500 -30421 -30334 -30220 -30100 -29992 -29873 -29775 -29692 -29619 -29554.63 -29496.57 -29441.5 -29404.8 5.7 -g 1 1 -2624 -2725 -2825 -2923 -3006 -3062 -3088 -3100 -3115 -3143 -3184 -3230 -3271 -3307 -3347 -3392 -3438 -3489 -3553 -3609 -3636 -3626 -3589 -3540 -3498 -3472 -3446 -3405 -3347 -3297 -3260 -3218 -3177 -3165 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165 181 203 228 249 261 264 260 254 250 251 254 257 258 251 238 223 207 185 158 133 110 87 63 37 13 -10 -21 -22 -12 3 34 62 84 103 119 133 146 163 186 206 216 224 240 251 262 271 284 293 302 293 269.72 251.75 245.0 241.9 -1.1 -g 3 3 -72 -89 -106 -121 -136 -149 -158 -163 -163 -161 -159 -157 -153 -149 -146 -144 -146 -151 -162 -178 -196 -218 -242 -268 -289 -303 -310 -312 -313 -315 -318 -319 -315 -304 -283 -254 -226 -205 -188 -167 -135 -97 -56 -14 26 62 92 116 147 199 262 318 363 400 423 430 432 433 435 450 482 528 572 635 705 778 839 881 907 918 916 913 896 882 878 856 838 830 833 829 802 759 714 672.51 633.73 581.7 525.7 -12.0 -h 3 3 -496 -474 -451 -426 -397 -364 -327 -287 -247 -207 -169 -134 -101 -69 -37 -4 33 75 124 181 244 311 378 444 509 573 638 702 763 823 881 936 983 1017 1035 1039 1031 1017 1004 997 997 996 989 978 965 953 945 941 937 940 938 918 888 851 805 759 712 670 637 612 590 561 523 480 425 360 293 229 166 101 43 -11 -46 -83 -130 -165 -196 -223 -252 -297 -352 -427 -491 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0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.57 -0.53 -0.4 -0.4 -0.3 0.0 +g 13 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.18 -0.26 -0.4 -0.4 -0.4 0.0 +h 13 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.82 -0.79 -0.7 -0.6 -0.5 0.0 diff --git a/aacgmv2/tests/__init__.py b/aacgmv2/tests/__init__.py new file mode 100644 index 00000000..cc869b34 --- /dev/null +++ b/aacgmv2/tests/__init__.py @@ -0,0 +1 @@ +"""Initialization file for test imports.""" diff --git a/aacgmv2/tests/environ/__init__.py b/aacgmv2/tests/environ/__init__.py new file mode 100644 index 00000000..acc5acef --- /dev/null +++ b/aacgmv2/tests/environ/__init__.py @@ -0,0 +1 @@ +"""Initialization file for environment test imports.""" diff --git a/aacgmv2/tests/environ/test_environ_aacgmv2.py b/aacgmv2/tests/environ/test_environ_aacgmv2.py index c6e4fd7a..834ab6a6 100644 --- a/aacgmv2/tests/environ/test_environ_aacgmv2.py +++ b/aacgmv2/tests/environ/test_environ_aacgmv2.py @@ -1,26 +1,38 @@ +"""Unit tests for the environment variables.""" import os import sys import pytest -@pytest.mark.xfail +def clean_import(): + """Remove the AAGCMV2 import.""" + if "aacgmv2" in sys.modules.keys(): + del sys.modules["aacgmv2"] + try: + del aacgmv2 + except Exception: + pass + + +@pytest.mark.skip(reason="Only run locally") class TestPyEnviron(object): """Unit tests for the AACGMV2 environment variables.""" def setup_method(self): """Create a clean test environment.""" self.igrf_path = os.path.join("aacgmv2", "aacgmv2", - "magmodel_1590-2020.txt") + "magmodel_1590-2025.txt") self.aacgm_path = os.path.join("aacgmv2", "aacgmv2", "aacgm_coeffs", - "aacgm_coeffs-13-") + "aacgm_coeffs-14-") + clean_import() def teardown_method(self): """Clean up the test environment.""" + clean_import() del self.igrf_path, self.aacgm_path def reset_evar(self, evar): """Reset the environment variables.""" - for coeff_key in evar: if coeff_key in os.environ.keys(): del os.environ[coeff_key] @@ -30,7 +42,6 @@ def reset_evar(self, evar): def test_good_coeff(self, aacgm_test=None, igrf_test=None): """Test the coefficient path/prefixes.""" - # Set the defaults if aacgm_test is None: aacgm_test = self.aacgm_path @@ -59,16 +70,14 @@ def test_bad_coeff(self, coeff): def test_top_parameters_default(self): """Test default module coefficients.""" - # Import AACGMV2 after removing any possible preset env variables self.reset_evar(evar=['AACGM_v2_DAT_PREFIX', 'IGRF_COEFFS']) + import aacgmv2 self.test_good_coeff(aacgmv2.AACGM_v2_DAT_PREFIX, aacgmv2.IGRF_COEFFS) assert not aacgmv2.__reset_warn__ - del sys.modules["aacgmv2"] - del aacgmv2 @pytest.mark.parametrize("evars", [(["AACGM_v2_DAT_PREFIX"]), (["AACGM_v2_DAT_PREFIX", "IGRF_COEFFS"]), @@ -91,12 +100,9 @@ def test_top_parameters_reset_evar_to_specified(self, evars): self.test_good_coeff(aacgmv2.AACGM_v2_DAT_PREFIX, aacgmv2.IGRF_COEFFS) assert aacgmv2.__reset_warn__ - del sys.modules["aacgmv2"] - del aacgmv2 def test_top_parameters_set_same(self): """Test module non-reset with outside def of both coefficient paths.""" - from aacgmv2 import __file__ as file_path coeff_path = os.path.realpath(os.path.dirname(file_path)) @@ -109,5 +115,3 @@ def test_top_parameters_set_same(self): self.test_good_coeff(aacgmv2.AACGM_v2_DAT_PREFIX, aacgmv2.IGRF_COEFFS) assert not aacgmv2.__reset_warn__ - del sys.modules["aacgmv2"] - del aacgmv2 diff --git a/aacgmv2/tests/test_c_aacgmv2.py b/aacgmv2/tests/test_c_aacgmv2.py index 0090d55d..4a3f6c64 100644 --- a/aacgmv2/tests/test_c_aacgmv2.py +++ b/aacgmv2/tests/test_c_aacgmv2.py @@ -1,3 +1,4 @@ +"""Unit tests for the AACGMV2 wrapped C code.""" import datetime as dt import numpy as np import pytest @@ -7,6 +8,7 @@ class TestCAACGMV2(object): """Unit tests for the AACGMV2 wrapped C code.""" + def setup_method(self): """Run before every method to create a clean testing setup.""" self.date_args = [(2014, 3, 22, 3, 11, 0), (2018, 1, 1, 0, 0, 0)] @@ -22,13 +24,13 @@ def setup_method(self): self.code = {'G2A': aacgmv2._aacgmv2.G2A, 'A2G': aacgmv2._aacgmv2.A2G, 'TG2A': aacgmv2._aacgmv2.G2A + aacgmv2._aacgmv2.TRACE, 'TA2G': aacgmv2._aacgmv2.A2G + aacgmv2._aacgmv2.TRACE} - self.lat_comp = {'G2A': [48.1902, 58.2194], 'A2G': [30.7550, 50.4371], - 'TG2A': [48.1954, 58.2189], 'TA2G': [30.7661, 50.4410]} - self.lon_comp = {'G2A': [57.7505, 80.7282], 'A2G': [-94.1724, -77.5323], - 'TG2A': [57.7456, 80.7362], - 'TA2G': [-94.1727, -77.5440]} - self.r_comp = {'G2A': [1.1775, 1.0457], 'A2G': [1133.6246, 305.7308], - 'TG2A': [1.1775, 1.0457], 'TA2G': [1133.6282, 305.7322]} + self.lat_comp = {'G2A': [48.1902, 58.2199], 'A2G': [30.7550, 50.4364], + 'TG2A': [48.1954, 58.2194], 'TA2G': [30.7661, 50.4403]} + self.lon_comp = {'G2A': [57.7505, 80.7290], 'A2G': [-94.1724, -77.5309], + 'TG2A': [57.7456, 80.7371], + 'TA2G': [-94.1727, -77.5426]} + self.r_comp = {'G2A': [1.1775, 1.0457], 'A2G': [1133.6246, 305.7305], + 'TG2A': [1.1775, 1.0457], 'TA2G': [1133.6282, 305.7319]} def teardown_method(self): """Run after every method to clean up previous testing.""" @@ -66,7 +68,7 @@ def test_set_datetime(self, idate): """ self.mlt = aacgmv2._aacgmv2.set_datetime(*self.date_args[idate]) - assert self.mlt is None + assert self.mlt is None, "MLT is {:}, not None".format(self.mlt) def test_fail_set_datetime(self): """Test unsuccessful set_datetime.""" diff --git a/aacgmv2/tests/test_cmd_aacgmv2.py b/aacgmv2/tests/test_cmd_aacgmv2.py index 40a321a5..aa1d071a 100644 --- a/aacgmv2/tests/test_cmd_aacgmv2.py +++ b/aacgmv2/tests/test_cmd_aacgmv2.py @@ -1,3 +1,4 @@ +"""Unit tests for the command line interface.""" import subprocess import numpy as np import os @@ -8,6 +9,7 @@ class TestCmdAACGMV2(object): """Unit tests for the command line interface.""" + def setup_method(self): """Run before every method to create a clean testing setup.""" self.test_dir = os.path.join(aacgmv2.__path__[0], 'tests', 'test_data') @@ -103,7 +105,7 @@ def test_convert_stdin_stdout(self): shell=True, stdout=subprocess.PIPE) stdout, _ = pin.communicate() pin.wait() - assert b'57.48099198 93.52895314' in stdout + assert b'57.48099346 93.52899517' in stdout @pytest.mark.parametrize('pin,ref', [([], [9.0912, 9.8246, 10.5579]), @@ -155,4 +157,4 @@ def test_convert_mlt_stdin_stdout(self, echo_command): pin = subprocess.Popen(echo_command, shell=True, stdout=subprocess.PIPE) stdout, _ = pin.communicate() pin.wait() - assert b'44.63126817' in stdout + assert b'44.63120804' in stdout diff --git a/aacgmv2/tests/test_dep_aacgmv2.py b/aacgmv2/tests/test_dep_aacgmv2.py deleted file mode 100644 index 34d4d347..00000000 --- a/aacgmv2/tests/test_dep_aacgmv2.py +++ /dev/null @@ -1,70 +0,0 @@ -import datetime as dt -import warnings - -import aacgmv2 - - -class TestFutureDepWarning(object): - """Unit tests for deprecation warnings.""" - def setup_method(self): - """Create a clean test environment.""" - # Initialize the routine to be tested - self.test_routine = None - self.test_args = [] - self.test_kwargs = {} - - def teardown_method(self): - """Clean up the test environment.""" - del self.test_routine, self.test_args, self.test_kwargs - - def test_future_dep_warning(self): - """Test the implementation of FutureWarning for dupicate routines.""" - if self.test_routine is None: - assert True - else: - with warnings.catch_warnings(record=True) as wout: - # Cause all warnings to always be triggered. - warnings.simplefilter("always") - - # Trigger a warning. - self.test_routine(*self.test_args, **self.test_kwargs) - - # Verify some things - assert len(wout) == 1 - assert issubclass(wout[-1].category, FutureWarning) - assert "Duplicate routine" in str(wout[-1].message) - - -class TestDepAACGMV2Warning(TestFutureDepWarning): - """Unit tests for AACGMV2 deprecation warnings.""" - def setup_method(self): - """Create a clean test environment.""" - self.dtime = dt.datetime(2015, 1, 1, 0, 0, 0) - self.test_routine = None - self.test_args = [] - self.test_kwargs = {} - - def teardown_method(self): - """Clean up the test environment.""" - del self.dtime, self.test_routine, self.test_args, self.test_kwargs - - def test_igrf_dipole_axis_warning(self): - """Test future deprecation warning for igrf_dipole_axis.""" - - self.test_routine = aacgmv2.deprecated.igrf_dipole_axis - self.test_args = [self.dtime] - self.test_future_dep_warning() - - def test_subsol_warning(self): - """Test future deprecation warning for subsol.""" - - self.test_routine = aacgmv2.deprecated.subsol - self.test_args = [self.dtime.year, 1, 1.0] - self.test_future_dep_warning() - - def test_gc2gd_lat(self): - """Test future deprecation warning for gc2gd_lat.""" - - self.test_routine = aacgmv2.deprecated.gc2gd_lat - self.test_args = [45.0] - self.test_future_dep_warning() diff --git a/aacgmv2/tests/test_py_aacgmv2.py b/aacgmv2/tests/test_py_aacgmv2.py index a5d1838f..4095ac50 100644 --- a/aacgmv2/tests/test_py_aacgmv2.py +++ b/aacgmv2/tests/test_py_aacgmv2.py @@ -1,3 +1,4 @@ +"""Unit tests for primary Python functions.""" import datetime as dt import logging import numpy as np @@ -10,6 +11,7 @@ class TestConvertArray(object): """Unit tests for array conversion.""" + def setup_method(self): """Create a clean test environment.""" self.dtime = dt.datetime(2015, 1, 1, 0, 0, 0) @@ -120,7 +122,7 @@ def test_convert_latlon_location_failure(self): assert np.all(np.isnan(np.array(self.out))) def test_convert_latlon_maxalt_failure(self): - """test convert_latlon failure for an altitude too high for coeffs.""" + """Test convert_latlon failure for an altitude too high for coeffs.""" self.in_args.extend([2001, self.dtime, ""]) self.out = aacgmv2.convert_latlon(*self.in_args) assert np.all(np.isnan(np.array(self.out))) @@ -270,7 +272,6 @@ def test_convert_latlon_arr_badidea(self, method_code, alt, local_ref): def test_convert_latlon_arr_location_failure(self): """Test array latlon conversion with a bad location.""" - with warnings.catch_warnings(): # Causes all warnings to be surpressed warnings.simplefilter("ignore") @@ -317,6 +318,7 @@ def test_convert_latlon_arr_maxalt_failure(self): "unrealistic latitude"), (None, 4, "unknown method code")]) def test_convert_latlon_arr_failure(self, in_rep, in_irep, msg): + """Test failure of convert_lonlat_arr for various bad inputs.""" in_args = np.array([self.lat_in, self.lon_in, self.alt_in, self.dtime, "G2A"], dtype=object) in_args[in_irep] = in_rep @@ -326,6 +328,7 @@ def test_convert_latlon_arr_failure(self, in_rep, in_irep, msg): class TestGetAACGMCoord(object): """Unit tests for AACGM coordinate conversion.""" + def setup_method(self): """Create a clean test environment.""" self.dtime = dt.datetime(2015, 1, 1, 0, 0, 0) @@ -494,7 +497,6 @@ def test_get_aacgm_coord_arr_location_failure(self): def test_get_aacgm_coord_arr_mult_failure(self): """Test aacgm_coord_arr failure with multi-dim array input.""" - with pytest.raises(ValueError): (self.mlat_out, self.mlon_out, self.mlt_out) = aacgmv2.get_aacgm_coord_arr( @@ -508,7 +510,6 @@ def test_get_aacgm_coord_arr_time_failure(self): def test_get_aacgm_coord_arr_mlat_failure(self): """Test error return for co-latitudes above 90 for an array.""" - self.lat_in = [91, 60, -91] with pytest.raises(ValueError): self.out = aacgmv2.get_aacgm_coord_arr(self.lat_in, self.lon_in[0], @@ -541,6 +542,7 @@ def test_get_aacgm_coord_arr_maxalt_failure(self): class TestConvertCode(object): """Unit tests for the conversion codes.""" + def setup_method(self): """Create a clean test environment.""" self.c_method_code = None @@ -809,18 +811,15 @@ def teardown_method(self): def test_low_height_good(self): """Test to see that a very low height is still accepted.""" - assert aacgmv2.wrapper.test_height(-1, self.code) def test_high_coeff_bad(self): """Test to see that a high altitude for coefficent use fails.""" - assert not aacgmv2.wrapper.test_height(aacgmv2.high_alt_coeff + 10.0, self.code) def test_high_coeff_good(self): """Test a high altitude for coefficent use with badidea.""" - assert aacgmv2.wrapper.test_height(aacgmv2.high_alt_coeff + 10.0, self.bad_code) diff --git a/aacgmv2/tests/test_struct_aacgmv2.py b/aacgmv2/tests/test_struct_aacgmv2.py index 4c32465b..7ac62d6e 100644 --- a/aacgmv2/tests/test_struct_aacgmv2.py +++ b/aacgmv2/tests/test_struct_aacgmv2.py @@ -1,3 +1,5 @@ +"""Unit tests for the AACGMV2 module structure.""" + import logging import numpy as np import os @@ -24,7 +26,6 @@ def teardown_method(self): def test_module_existence(self): """Test the module existence.""" - # Get the dictionary of functions for the specified module retrieved_dict = aacgmv2.__dict__ @@ -38,7 +39,6 @@ def test_module_existence(self): def test_module_functions(self): """Test module function structure.""" - # Get the dictionary of functions for the specified module retrieved_dict = aacgmv2.__dict__ @@ -62,7 +62,6 @@ def test_module_functions(self): def test_modules(self): """Test module submodule structure.""" - if self.module_name is None: assert True else: @@ -76,29 +75,6 @@ def test_modules(self): assert len(retrieved_list) == len(self.reference_list) -class TestDepStructure(TestModuleStructure): - """Test the deprecated structure.""" - - def setup_method(self): - """Create a clean test environment.""" - self.module_name = None - self.reference_list = ["subsol", "igrf_dipole_axis", "gc2gd_lat"] - - def teardown_method(self): - """Clean up the test environment.""" - del self.module_name, self.reference_list - - def test_dep_existence(self): - """Test the deprecated functions.""" - self.module_name = "deprecated" - self.test_module_existence() - - def test_dep_functions(self): - """Test the deprecated functions.""" - self.module_name = "deprecated" - self.test_module_functions() - - class TestUtilsStructure(TestModuleStructure): """Test the utility structure.""" @@ -111,13 +87,13 @@ def teardown_method(self): """Clean up the test environment.""" del self.module_name, self.reference_list - def test_dep_existence(self): - """Test the utility functions.""" + def test_utils_existence(self): + """Test the utility existence.""" self.module_name = "utils" self.test_module_existence() - def test_dep_functions(self): - """Test the utility functions.""" + def test_utils_functions(self): + """Test the utils functions.""" self.module_name = "utils" self.test_module_functions() @@ -193,7 +169,7 @@ def test_top_existence(self): self.test_module_existence() def test_top_functions(self): - """Test the deprecated functions.""" + """Test the top level functions.""" self.module_name = "aacgmv2" self.reference_list = ["convert_bool_to_bit", "convert_str_to_bit", "convert_mlt", "convert_latlon", @@ -202,10 +178,10 @@ def test_top_functions(self): self.test_module_functions() def test_top_modules(self): - """Test the deprecated functions.""" + """Test the top level modules.""" self.module_name = "aacgmv2" - self.reference_list = ["_aacgmv2", "wrapper", "utils", - "deprecated", "__main__"] + self.reference_list = ["_aacgmv2", "wrapper", "utils", "__main__", + 'tests'] self.test_modules() @@ -217,9 +193,9 @@ def setup_method(self): self.alt_limits = {"coeff": 2000.0, "trace": 6378.0} self.coeff_file = {"coeff": os.path.join("aacgmv2", "aacgmv2", "aacgm_coeffs", - "aacgm_coeffs-13-"), + "aacgm_coeffs-14-"), "igrf": os.path.join("aacgmv2", "aacgmv2", - "magmodel_1590-2020.txt")} + "magmodel_1590-2025.txt")} def teardown_method(self): """Clean up the test environment.""" @@ -239,7 +215,6 @@ def test_top_parameters(self, env_var, fkey): Corresponding dict key """ - if env_var.find(self.coeff_file[fkey]) < 0: raise AssertionError("Bad env variable: {:} not {:}".format( self.coeff_file[fkey], env_var)) @@ -258,7 +233,6 @@ def test_high_alt_variables(self, alt_var, alt_ref): Output dict key """ - if not isinstance(alt_var, type(self.alt_limits[alt_ref])): raise TypeError("Altitude limit variable isn't a float") @@ -267,6 +241,5 @@ def test_high_alt_variables(self, alt_var, alt_ref): def test_module_logger(self): """Test the module logger instance.""" - if not isinstance(aacgmv2.logger, logging.Logger): raise TypeError("Logger incorrect type") diff --git a/aacgmv2/tests/test_utils_aacgmv2.py b/aacgmv2/tests/test_utils_aacgmv2.py index 4a5eee93..13bec87c 100644 --- a/aacgmv2/tests/test_utils_aacgmv2.py +++ b/aacgmv2/tests/test_utils_aacgmv2.py @@ -1,3 +1,4 @@ +"""Unit tests for the utility functions.""" import datetime as dt import numpy as np import pytest @@ -47,9 +48,9 @@ def test_subsol_raises_time_range(self, year): self.out = utils.subsol(year, 1, 0.0) @pytest.mark.parametrize('year,ref', - [(1500, [0.141408, -0.48357, 0.86381]), + [(1500, [0.167107, -0.397251, 0.902367]), (2015, [0.050281, -0.16057, 0.98574]), - (2110, [0.027069, -0.08006, 0.99642])]) + (2110, [0.019718, -0.095652, 0.99522])]) def test_igrf_dipole_axis(self, year, ref): """Test the IGRF dipole axis calculation. diff --git a/aacgmv2/utils.py b/aacgmv2/utils.py index 79befc25..f4524bce 100644 --- a/aacgmv2/utils.py +++ b/aacgmv2/utils.py @@ -33,7 +33,6 @@ def gc2gd_lat(gc_lat): Geodetic latitude in degrees N, same type as input `gc_lat` """ - wgs84_e2 = 0.006694379990141317 - 1.0 gd_lat = np.rad2deg(-np.arctan(np.tan(np.deg2rad(gc_lat)) / wgs84_e2)) @@ -81,7 +80,6 @@ def subsol(year, doy, utime): by K. Laundal. """ - # Convert from 4 digit year to 2 digit year yr2 = year - 2000 @@ -161,7 +159,6 @@ def igrf_dipole_axis(date): date, or extrapolated if date > latest IGRF model """ - # Get time in years, as float year = date.year doy = date.timetuple().tm_yday diff --git a/aacgmv2/wrapper.py b/aacgmv2/wrapper.py index a45ad7bc..ac8f2ce0 100644 --- a/aacgmv2/wrapper.py +++ b/aacgmv2/wrapper.py @@ -118,7 +118,6 @@ def set_coeff_path(igrf_file=False, coeff_prefix=False): aacgmv2.AACGM_V2_DAT_PREFIX, or False to leave as is. (default=False) """ - # Define coefficient file prefix if requested if coeff_prefix is not False: # Use the default value, if one was not supplied (allow None to @@ -536,7 +535,6 @@ def convert_str_to_bit(method_code): are ignored and no code defaults to 'G2A'. """ - convert_code = {"G2A": c_aacgmv2.G2A, "A2G": c_aacgmv2.A2G, "TRACE": c_aacgmv2.TRACE, "BADIDEA": c_aacgmv2.BADIDEA, "GEOCENTRIC": c_aacgmv2.GEOCENTRIC, @@ -576,7 +574,6 @@ def convert_bool_to_bit(a2g=False, trace=False, allowtrace=False, code specification in bits """ - bit_code = c_aacgmv2.A2G if a2g else c_aacgmv2.G2A if trace: @@ -592,7 +589,7 @@ def convert_bool_to_bit(a2g=False, trace=False, allowtrace=False, def convert_mlt(arr, dtime, m2a=False): - """Converts between magnetic local time (MLT) and AACGM-v2 longitude. + """Convert between magnetic local time (MLT) and AACGM-v2 longitude. Parameters ---------- @@ -615,7 +612,6 @@ def convert_mlt(arr, dtime, m2a=False): improved calculation available in AACGM-V2.4. """ - arr = np.asarray(arr) if arr.shape == (): arr = np.array([arr]) diff --git a/c_aacgmv2/README.txt b/c_aacgmv2/README.txt old mode 100644 new mode 100755 index f958ab17..e716cb31 --- a/c_aacgmv2/README.txt +++ b/c_aacgmv2/README.txt @@ -1,5 +1,11 @@ AACGM-v2 Software -v2.6 20191228 +v2.7 20241123 + +How to cite: + +Shepherd, S. G. (2014), Altitude-adjusted corrected geomagnetic coordinates: +Definition and functional approximations, J. Geophys. Res. Space Physics, 119, +7501–7521, doi:10.1002/2014JA020264. C Instructions: @@ -7,11 +13,11 @@ C Instructions: 2. Set the environment variable AACGM_v2_DAT_PREFIX to the directory that you are storing the coefficients in AND include the prefix of the - coefficient files, i.e., aacgm_coeffs-13- + coefficient files, i.e., aacgm_coeffs-14- e.g.: - AACGM_v2_DAT_PREFIX=/mnt/thayerfs/shepherd/AACGM/idl/coeffs/aacgm_coeffs-13- + AACGM_v2_DAT_PREFIX=/mnt/thayerfs/shepherd/AACGM/idl/coeffs/aacgm_coeffs-14- Note that if you used the old AACGM software from JHU/APL you should have a similar variable already set. @@ -19,15 +25,15 @@ C Instructions: 3. Untar the contents of the .tar file into a directory 4. Setup the magnetic field model by putting the GUFM1/IGRF coefficients file - (magmodel_1590-2020.txt) somewhere or leaving them in the current directory + (magmodel_1590-2025.txt) somewhere or leaving them in the current directory and setting the environment variable IGRF_COEFFS to the fully qualified path, i.e., - IGRF_COEFFS=/directory_you_put_IGRF_coefs_in/magmodel_1590-2020.txt + IGRF_COEFFS=/directory_you_put_IGRF_coefs_in/magmodel_1590-2025.txt 5. Build the test program by running: - gcc -o test_aacgm test_aacgm.c aacgmlib_v2.c igrflib.c genmag.c astalglib.c \ + gcc -o test_aacgm test_aacgm.c aacgmlib_v2.c igrflib.c astalglib.c \ mlt_v2.c rtime.c -lm 6. Run the test program by running: @@ -62,25 +68,25 @@ TEST: no date/time (this will return an error.) * that was set, so update to the actual date and time that is desired. * ************************************************************************** -TEST: Setting time to : 20240322 0311:00 +TEST: Setting time to : 20290322 0311:00 TEST: geographic to AACGM-v2 GLAT GLON HEIGHT MLAT MLON R - 45.500000 -23.500000 1135.000000 47.588773 56.761655 1.177533 + 45.500000 -23.500000 1135.000000 47.402897 56.602300 1.177533 TEST: AACGM-v2 to geographic MLAT MLON HEIGHT GLAT GLON HEIGHT - 47.588773 56.761655 1131.097495 45.439106 -23.475908 1134.977273 + 47.402897 56.602300 1131.097495 45.439863 -23.477496 1134.977555 Do the same thing but use field-line tracing TEST: geographic to AACGM-v2 (TRACE) GLAT GLON HEIGHT MLAT MLON R - 45.500000 -23.500000 1135.000000 47.594236 56.760096 1.177533 + 45.500000 -23.500000 1135.000000 47.408678 56.600154 1.177533 TEST: AACGM-v2 to geographic (TRACE) MLAT MLON HEIGHT GLAT GLON HEIGHT - 47.594236 56.760096 1131.097495 45.500002 -23.500000 1135.000001 + 47.408678 56.600154 1131.097495 45.500000 -23.500000 1135.000000 -------------------------------------------------------------------------------- @@ -164,21 +170,19 @@ This package include the following files: AACGM C software: README.txt ; this file -release_notes.txt ; details of changes to v2.6 +release_notes.txt ; details of changes to v2.7 aacgmlib_v2.c ; AACGM-v2 functions aacgmlib_v2.h ; AACGM-v2 header file -genmag.c ; general purpose functions -genmag.h ; general purpose header file igrflib.c ; internal IGRF functions igrflib.h ; internal IGRF header file rtime.c ; internal date/time functions rtime.h ; internal date/time header file -astalg.c ; Astronomical algorithms functions +astalglib.c ; Astronomical algorithms functions astalg.h ; Astronomical algorithms header file mlt_v2.c ; MLT-v2 functions mlt_v2.h ; MLT-v2 header file -igrf13coeffs.txt ; IGRF13 coefficients (1900-2020) -magmodel_1590-2020.txt; magnetic field coefficients (1590-2020) +igrf14coeffs.txt ; IGRF14 coefficients (1900-2025) +magmodel_1590-2025.txt; magnetic field coefficients (1590-2025) test_aacgm.c ; testing and example program LICENSE-AstAlg.txt ; license file for Astro algrorithms diff --git a/c_aacgmv2/include/aacgmlib_v2.h b/c_aacgmv2/include/aacgmlib_v2.h old mode 100644 new mode 100755 index 7b4137ab..16445cc7 --- a/c_aacgmv2/include/aacgmlib_v2.h +++ b/c_aacgmv2/include/aacgmlib_v2.h @@ -64,6 +64,9 @@ int AACGM_v2_SetDateTime(int year, int month, int day, int AACGM_v2_GetDateTime(int *year, int *month, int *day, int *hour, int *minute, int *second, int *dayno); int AACGM_v2_SetNow(void); +int AACGM_v2_Lock(void); +int AACGM_v2_Unlock(void); +int AACGM_v2_Locked(void); #endif diff --git a/c_aacgmv2/include/astalg.h b/c_aacgmv2/include/astalg.h old mode 100644 new mode 100755 diff --git a/c_aacgmv2/include/igrflib.h b/c_aacgmv2/include/igrflib.h old mode 100644 new mode 100755 index 054beb65..4a6d6ba1 --- a/c_aacgmv2/include/igrflib.h +++ b/c_aacgmv2/include/igrflib.h @@ -2,7 +2,7 @@ #define _IGRFLIB_ #define IGRF_FIRST_EPOCH 1590 -#define IGRF_LAST_EPOCH 2020 +#define IGRF_LAST_EPOCH 2025 /* SGS using IGRF_COEFFS environment variable */ /*#define IGRF_FILE "igrf12coeffs.txt"*/ /* current IGRF model */ @@ -21,6 +21,8 @@ #define DTOR (M_PI/180.) #define MIN(a,b) ((a) < (b) ? (a) : (b)) +#define SIGN(x) ( ((x) > 0) ? 1 : (((x) < 0) ? -1 : 0) ) +#define MOD(a,b) ( (a) - floor((a)/(b))*(b) ) /* function prototypes */ @@ -39,6 +41,13 @@ int IGRF_SetDateTime(int year, int month, int day, int hour, int minute, int second); double IGRF_Tilt(int yr, int mo, int dy, int hr, int mt, int sc); +/* eccentric dipole functions */ +int geod2ecdip(double lat, double lon, double alt, double out[]); +int ecdip2geod(double elat, double elon, double r, double out[]); +double ecdip_mlt(int yr, int mo, int dy, int hr, int mt, int sc, double elon); +double inv_ecdip_mlt(int yr,int mo,int dy, int hr,int mt,int sc, double mlt); +double ecdip_mlt_ref(int yr, int mo, int dy, int hr, int mt, int sc); + /* some geopack functionality */ int geo2mag(const double xyzg[], double xyzm[]); int mag2geo(const double xyzm[], double xyzg[]); diff --git a/c_aacgmv2/include/mlt_v2.h b/c_aacgmv2/include/mlt_v2.h old mode 100644 new mode 100755 diff --git a/c_aacgmv2/include/rtime.h b/c_aacgmv2/include/rtime.h old mode 100644 new mode 100755 index 79fd9f83..a7c656ca --- a/c_aacgmv2/include/rtime.h +++ b/c_aacgmv2/include/rtime.h @@ -22,5 +22,7 @@ int TimeJulianToYMDHMS(double jd, void TimeReadClock(int *yr, int *mo, int *dy, int *hr, int *mn, int *sc, int *usc); +int dayno(int year, int month, int day, int *diy); + #endif diff --git a/c_aacgmv2/release_notes.txt b/c_aacgmv2/release_notes.txt old mode 100644 new mode 100755 index 7d845fd7..ca335ceb --- a/c_aacgmv2/release_notes.txt +++ b/c_aacgmv2/release_notes.txt @@ -1,20 +1,50 @@ -v2.6 Changes +How to cite: -Features: - -+ 20191228 added AACGM-v2 coefficients derived using IGRF13 model. Note that - - Note that there are some small differences (less than 1 km) +Shepherd, S. G. (2014), Altitude-adjusted corrected geomagnetic coordinates: +Definition and functional approximations, J. Geophys. Res. Space Physics, 119, +7501–7521, doi:10.1002/2014JA020264. - added file magmodel_1590-2020.txt which contains GUFM1 and IGRF13 - coefficients +v2.7 Changes - added additional checks in igrflib.c for reading new coefficients. - Note: igrf13coeffs.txt had an additional space at the end of - each line that required these additional checks. +Features: ++ 20220705 added a feature to 'lock' AACGM-v2 date and time in order to + significantly speed up calculations that constantly check to see if + the date/time has changed in order to load new coefficients. Adding + the HMB, for instance, does this check and the date function is + called several times for each check, causing it to run ~3x slower + than it did before AACGM-v2 introduced a date/time feature. + + A member was added to the AACGM-v2 date/time structure to indicate + the status of the 'lock' and is accessed by these three new + functions: + + int AACGM_v2_Lock(void); /* lock AACGM-v2 date/time so no check */ + int AACGM_v2_Unlock(void); /* unlock AACGM-v2 date/time [default] */ + int AACGM_v2_Locked(void); /* query status locked flag */ + ++ 20230807 added functions to igrflib.c in order to perform conversions to and + and from eccentric dipole coordinates, with corresponding MLT + functions. + + geod2ecdip - convert from geodetic to eccentric dipole coordinates + ecdip2geod - convert from eccentric dipole to geodetic coordinates + ecdip_mlt - compute MLT of eccentric dipole longitude + inv_ecdip_mlt - compute eccentric dipole longitude of MLT + ecdip_mlt_ref - reference eccentric dipole longitude for MLT + ++ 20230807 moved the single function dayno() from genmag.c to rtime.c in order + to remove dependency on aacgm library. The files genmag.c and + genmag.h have been removed. + ++ 20241122 added AACGM-v2 coefficients derived using IGRF14 model. + added file magmodel_1590-2025.txt which contains GUFM1 and IGRF14 + coefficients changed error message in aacgmlib_v2.c for date/time out of bounds Bug fixes: + Fixed integer division in rtime.c for function TimeYMDHMSToJulian resulting + in times being set to start of the day. + diff --git a/c_aacgmv2/src/aacgmlib_v2.c b/c_aacgmv2/src/aacgmlib_v2.c old mode 100644 new mode 100755 index 44ed96d2..2d19ee87 --- a/c_aacgmv2/src/aacgmlib_v2.c +++ b/c_aacgmv2/src/aacgmlib_v2.c @@ -37,6 +37,9 @@ ; AACGM_v2_SetDateTime ; AACGM_v2_GetDateTime ; AACGM_v2_SetNow +; AACGM_v2_Lock +; AACGM_v2_Unlock +; AACGM_v2_Locked ; AACGM_v2_errmsg ; @@ -53,9 +56,9 @@ #include #include #include +#include "rtime.h" #include "aacgmlib_v2.h" #include "igrflib.h" -#include "genmag.h" #define DEBUG 0 @@ -69,7 +72,8 @@ static struct { int second; int dayno; int daysinyear; -} aacgm_date = {-1,-1,-1,-1,-1,-1,-1,-1}; + int locked; +} aacgm_date = {-1,-1,-1,-1,-1,-1,-1,-1,0}; static int myear = 0; /* model year: 5-year epoch */ static double fyear = 0.; /* floating point year */ @@ -870,7 +874,7 @@ int AACGM_v2_LoadCoefs(int year) { char fname[256]; char root[256]; - char yrstr[5]; + char yrstr[11]; int ret=0; #if DEBUG > 0 @@ -1016,7 +1020,7 @@ int AACGM_v2_Convert(double in_lat, double in_lon, double height, /* height > 2000 km not allowed for coefficients */ if (height > MAXALT && !(code & (TRACE|ALLOWTRACE|BADIDEA))) { - fprintf(stderr, "ERROR: coefficients are not valid for altitudes " + fprintf(stderr, "AACGM-v2 ERROR: coefficients are not valid for altitudes " "above %d km: %lf.\n", MAXALT, height); fprintf(stderr, " You must either use field-line tracing " "(TRACE or ALLOWTRACE) or\n" @@ -1057,7 +1061,7 @@ int AACGM_v2_Convert(double in_lat, double in_lon, double height, ; err = AACGM_v2_SetDateTime(year, month, day, hour, minute, second); ; ; Input Arguments: -; year - year [1900-2025) +; year - year [1900-2030) ; month - month of year [01-12] ; day - day of month [01-31] ; hour - hour of day [00-24] @@ -1207,6 +1211,79 @@ int AACGM_v2_SetNow(void) return err; } +/*----------------------------------------------------------------------------- +; +; NAME: +; AACGM_v2_Lock +; +; PURPOSE: +; Function to set lock, which will prevent extra date and time checks +; when performing MLT_v2 conversions. +; +; CALLING SEQUENCE: +; err = AACGM_v2_Lock(); +; +; Return Value: +; error code +; +;+----------------------------------------------------------------------------- +*/ + +int AACGM_v2_Lock(void) +{ + aacgm_date.locked = 1; + + return 0; +} + +/*----------------------------------------------------------------------------- +; +; NAME: +; AACGM_v2_Unlock +; +; PURPOSE: +; Function to remove lock, which will enforce date and time checks when +; performing MLT_v2 conversions (default behavior). +; +; CALLING SEQUENCE: +; err = AACGM_v2_Unlock(); +; +; Return Value: +; error code +; +;+----------------------------------------------------------------------------- +*/ + +int AACGM_v2_Unlock(void) +{ + aacgm_date.locked = 0; + + return 0; +} + +/*----------------------------------------------------------------------------- +; +; NAME: +; AACGM_v2_Locked +; +; PURPOSE: +; Function to get lock status, which can be used to either enforce or +; prevent extra date and time checks when performing MLT_v2 conversions. +; +; CALLING SEQUENCE: +; locked = AACGM_v2_Locked(); +; +; Return Value: +; lock status +; +;+----------------------------------------------------------------------------- +*/ + +int AACGM_v2_Locked(void) +{ + return (aacgm_date.locked); +} + /*----------------------------------------------------------------------------- ; ; NAME: @@ -1253,8 +1330,8 @@ void AACGM_v2_errmsg(int ecode) fprintf(stderr, "* AACGM-v2 ERROR: Date out of bounds *\n" "* *\n" - "* The current date range for AACGM-v2 coordinates is [1990-2025), which *\n" - "* corresponds to the date range for the IGRF12 model, including the *\n" + "* The current date range for AACGM-v2 coordinates is [1990-2030), which *\n" + "* corresponds to the date range for the IGRF14 model, including the *\n" "* 5-year secular variation. *" "\n"); break; diff --git a/c_aacgmv2/src/astalglib.c b/c_aacgmv2/src/astalglib.c old mode 100644 new mode 100755 diff --git a/c_aacgmv2/src/genmag.c b/c_aacgmv2/src/genmag.c deleted file mode 100644 index 957e1cd7..00000000 --- a/c_aacgmv2/src/genmag.c +++ /dev/null @@ -1,44 +0,0 @@ -/*----------------------------------------------------------------------------- -; -; NAME: -; dayno -; -; PURPOSE: -; Function to compute the day of the year and the number of days in the -; year. -; -; CALLING SEQUENCE: -; doy = dayno(year, month, day, diy); -; -; Input Arguments: -; year - year [1965-2014] -; month - month of year [01-12] -; day - day of month [01-31] -; -; Output Arguments (integer pointers): -; diy - number of days in the given year -; -; Return Value: -; error code -; -;+----------------------------------------------------------------------------- -*/ - -int dayno(int year, int month, int day, int *diy) -{ - int k,tot; - int ndays[] = {31,28,31,30,31,30,31,31,30,31,30,31}; - - *diy = 365; - if(((year%4==0)&&(year%100!=0))||(year%400==0)) { - ndays[1]++; - *diy = 366; - } - - tot = 0; - for (k=0; k #include #include "igrflib.h" -#include "genmag.h" #include "astalg.h" +#include "rtime.h" /*#define DEBUG 1*/ /* TO DO: should these go in igrflib.h? */ @@ -32,6 +32,14 @@ static struct { double sl0; } geopack = {0.,0.,0.,0.,0.,0.,0.,0.}; +struct { /* eccentric dipole structure */ + double B02, B0; + double latref, lonref; + double g2m[3][3]; + double L0, L1, L2, E; + double pos[3]; +} ecdip; + static double IGRF_coef_set[MAXNYR][IGRF_MAXK]; /* all the coefficients */ static double IGRF_svs[IGRF_MAXK]; /* secular variations */ static double IGRF_coefs[IGRF_MAXK]; /* interpolated coefficients */ @@ -74,7 +82,7 @@ void igrf_pause(void) ; ; Input Arguments: ; filename - name of file which contains IGRF coefficients; default -; is current IGRF model: igrf12coeffs.txt +; is current IGRF model: igrf14coeffs.txt ; ; Return Value: ; error code @@ -554,9 +562,11 @@ int IGRF_compute(const double rtp[], double brtp[]) { */ int IGRF_interpolate_coefs(void) { - int i,k,l,m, myear; + int i,k,l,m,n, myear; double fyear; double g10,g11,h11,sq,sqq,sqr; + double fac, ca,cb,sa,sb; + double Slm[IGRF_MAXK], fctrl[2*IGRF_ORDER+1]; #if DEBUG > 0 printf("** TIME INTERPOLATION **\n"); @@ -638,6 +648,76 @@ int IGRF_interpolate_coefs(void) { printf("ctcl = %lf\n", geopack.ctcl); #endif + /* for eccentric dipole coordinates */ + + /* factorial for un-normalization */ + fctrl[0] = fctrl[1] = 1.; + for (k=2; k<= 2*IGRF_ORDER; k++) fctrl[k] = k*fctrl[k-1]; + + for (l=0; l<=IGRF_ORDER; l++) { + for (m=0; m<=l; m++) { + k = l * (l+1) + m; /* 1D index for l,m */ + n = l * (l+1) - m; /* 1D index for l,m */ + + fac = (m) ? 2 : 1; + /* Davis 2004; Wertz 1978 recursion + Slm[k] = Slm[n] = sqrt(fac*fctrl[l-m]/fctrl[l+m])*dfc[2*l-1]/fctrl[l-m]; + */ + /* Winch 2004 */ + Slm[k] = Slm[n] = sqrt(fac*fctrl[l-m]/fctrl[l+m]); + } + } + + /* S_(1,-1)^2 + S_(1,0)^2 + S_(1,1)^2 */ + ecdip.B02 = IGRF_coefs[1]*IGRF_coefs[1]/(Slm[1]*Slm[1]) + + IGRF_coefs[2]*IGRF_coefs[2]/(Slm[2]*Slm[2]) + + IGRF_coefs[3]*IGRF_coefs[3]/(Slm[3]*Slm[3]); + ecdip.B0 = sqrt(ecdip.B02); + + ecdip.latref = asin(-IGRF_coefs[2]/Slm[2]/ecdip.B0)/DTOR; + ecdip.lonref = 180 + atan2(IGRF_coefs[1]/Slm[1],IGRF_coefs[3]/Slm[3])/DTOR; + + ca = cos(ecdip.latref*DTOR); + sa = sin(ecdip.latref*DTOR); + cb = cos(ecdip.lonref*DTOR); + sb = sin(ecdip.lonref*DTOR); + + ecdip.g2m[0][0] = sa*cb; + ecdip.g2m[0][1] = sa*sb; + ecdip.g2m[0][2] = -ca; + ecdip.g2m[1][0] = -sb; + ecdip.g2m[1][1] = cb; + ecdip.g2m[1][2] = 0.; + ecdip.g2m[2][0] = cb*ca; + ecdip.g2m[2][1] = ca*sb; + ecdip.g2m[2][2] = sa; + + /* 2*S10*S20 + sqrt(3)*(S11*S21 + S1-1*S2-1) */ + ecdip.L0 = 2 * IGRF_coefs[2]/Slm[2] * IGRF_coefs[6]/Slm[6] + + sqrt(3) * (IGRF_coefs[3]/Slm[3] * IGRF_coefs[7]/Slm[7] + + IGRF_coefs[1]/Slm[1] * IGRF_coefs[5]/Slm[5]); + + /* -S11*S20 + sqrt(3)*(S10*S21 + S11*S30 + S1-1*S2-2) */ + ecdip.L1 = - IGRF_coefs[3]/Slm[3] * IGRF_coefs[6]/Slm[6] + + sqrt(3) * (IGRF_coefs[2]/Slm[2] * IGRF_coefs[7]/Slm[7] + + IGRF_coefs[3]/Slm[3] * IGRF_coefs[12]/Slm[12] + + IGRF_coefs[1]/Slm[1] * IGRF_coefs[4]/Slm[4]); + + /* -S1-1*S20 + sqrt(3)*(S10*S2-1 - S1-1*S30 + S11*S2-2) */ + ecdip.L2 = - IGRF_coefs[1]/Slm[1] * IGRF_coefs[6]/Slm[6] + + sqrt(3) * (IGRF_coefs[2]/Slm[2] * IGRF_coefs[5]/Slm[5] - + IGRF_coefs[1]/Slm[1] * IGRF_coefs[12]/Slm[12] + + IGRF_coefs[3]/Slm[3] * IGRF_coefs[4]/Slm[4]); + + /* (L0*S10 + L1*S11 + L2*S1-1)/4/B02 */ + ecdip.E = (ecdip.L0 * IGRF_coefs[2]/Slm[2] + + ecdip.L1 * IGRF_coefs[3]/Slm[3] + + ecdip.L2 * IGRF_coefs[1]/Slm[1])/4./ecdip.B02; + + ecdip.pos[0] = RE * (ecdip.L1 - IGRF_coefs[3]/Slm[3]*ecdip.E) /3./ecdip.B02; + ecdip.pos[1] = RE * (ecdip.L2 - IGRF_coefs[1]/Slm[1]*ecdip.E) /3./ecdip.B02; + ecdip.pos[2] = RE * (ecdip.L0 - IGRF_coefs[2]/Slm[2]*ecdip.E) /3./ecdip.B02; + return (0); } @@ -1167,6 +1247,235 @@ int mag2geo(const double xyzm[], double xyzg[]) { return (0); } +/*----------------------------------------------------------------------------- +; +; NAME: +; geod2ecdip (translated from Pierre-Louis Blelly Matlab code) +; +; PURPOSE: +; Convert from geodetic coordinates (as specified by WGS84) to +; eccentric dipole coordinates. +; +; CALLING SEQUENCE: +; err = geod2ecdip(lat,lon,alt, out); +; +; Input Arguments: +; lat,lon - geodetic latitude and longitude [degrees N and E] +; alt - distance above sea level [km] +; +; Output Argument: +; out[3] - eccentric dipole coordinates +; +; Return Value: +; error code +; +;+----------------------------------------------------------------------------- +*/ +int geod2ecdip(double lat, double lon, double alt, double out[]) +{ + int i,k, err; + int yr,dy,mo, hr,mt,sc, dyno; + double d, r, rr, B0, latmag,lonmag; + double sd,cd, Rmag, L, B, dip, tmag; + double xyz[3], XYZ[3], coord[3]; + double lonmag_ref; + + #if DEBUG > 0 + printf("geod2ecdip\n"); + #endif + + /* no date/time set so bail */ + if (igrf_date.year < 0) { + IGRF_msg_notime(); + return -128; + } + + //err = IGRF_GetDateTime(&yr, &mo, &dy, &hr, &mt, &sc, &dyno); + //lonmag_ref = ecdip_mlt_ref(yr,mo,dy, hr,mt,sc); + + //B0 = ecdip.B0*1e-5; + geod2geoc(lat,lon,alt, out); + out[0] *= RE; + sph2car(out, xyz); + + for (k=0; k<3; k++) XYZ[k] = xyz[k] - ecdip.pos[k]; + + r = sqrt(XYZ[0]*XYZ[0] + XYZ[1]*XYZ[1] + XYZ[2]*XYZ[2]); + for (k=0; k<3; k++) XYZ[k] /= r; + + /* coord=vec*g2m'; 1x3 * 3x3 = 1x3 */ + for (k=0; k<3; k++) { + coord[k] = 0.; + for (i=0; i<3; i++) coord[k] += XYZ[i]*ecdip.g2m[k][i]; + } + + d = coord[0]*coord[0] + coord[1]*coord[1]; + if (d == 0) { + latmag = SIGN(coord[2])*90; + lonmag = ecdip.lonref; + } else if (d > 0) { + latmag = asin(coord[2])/DTOR; + lonmag = atan2(coord[1],coord[0])/DTOR; + } else { + /* set to nans? */ + latmag = NAN; + lonmag = NAN; + } + + //rr = RE/r; + //cd = cos(latmag*DTOR); + //sd = sin(latmag*DTOR); + + //L = r/RE/(cd*cd); + //B = B0 * sqrt(3* sd*sd + 1)*rr*rr*rr; + //dip = atan2(2*sd,cd)/DTOR; + //tmag = 48 + (lonmag-lonmag_ref)/15.; + //tmag -= floor(tmag/24)*24; + + out[0] = latmag; + out[1] = lonmag; + out[2] = r; + + return (0); +} + +/*----------------------------------------------------------------------------- +; +; NAME: +; ecdip2geod (translated from Pierre-Louis Blelly Matlab code) +; +; PURPOSE: +; Convert from eccentric diople coordinates to geodetic coordinates +; (as specified by WGS84). +; +; CALLING SEQUENCE: +; err = ecdip2geod(lat,lon,r, out); +; +; Input Arguments: +; lat,lon - eccentric dipole latitude and longitude [degrees N & E] +; r - radial distance [km] +; +; Output Argument: +; out[3] - geodetic latitude, longitude [deg] and altitude [km] +; +; Return Value: +; error code +; +;+----------------------------------------------------------------------------- +*/ +int ecdip2geod(double elat, double elon, double r, double out[]) +{ + int i, k; + double XYZ[3], coord[3], rtp[3]; + double lat,lon; + + #if DEBUG > 0 + printf("ecdip2geod\n"); + #endif + + /* no date/time set so bail */ + if (igrf_date.year < 0) { + IGRF_msg_notime(); + return -128; + } + + //B0 = ecdip.B0*1e-5; + + //rr = RE/r; + //cd = cos(elat*DTOR); + //sd = sin(elat*DTOR); + + //L = r/RE/(cd*cd); + //B = B0 * sqrt(3* sd*sd + 1)*rr*rr*rr; + //dip = atan2(2*sd,cd)/DTOR; + + XYZ[0] = r * cos(elon*DTOR) * cos(elat*DTOR); + XYZ[1] = r * sin(elon*DTOR) * cos(elat*DTOR); + XYZ[2] = r * sin(elat*DTOR); + + /* coord=g2m'*vec; 3x3 * 3x1 = 3x1 */ + for (k=0; k<3; k++) { + coord[k] = 0.; + for (i=0; i<3; i++) coord[k] += ecdip.g2m[i][k]*XYZ[i]; + } + + for (k=0; k<3; k++) XYZ[k] = coord[k] + ecdip.pos[k]; + + car2sph(XYZ, rtp); + + lat = 90.-rtp[1]/DTOR; + lon = rtp[2]/DTOR; + if (lon > 180) lon -= 360; + if (lon < -180) lon += 360; + geoc2geod(lat,lon,rtp[0]/RE, out); + + return (0); +} + +/*----------------------------------------------------------------------------- +; +; NAME: +; ecdip_mlt +; +; PURPOSE: +; Determine MLT for given date/time and eccentric dipole longitude. +; +; CALLING SEQUENCE: +; mlt = ecdip_mlt(yr,mo,dy, hr,mt,sc, elon); +; +; Input Arguments: +; yr,mo,dy - date as integers +; hr,mt,sc - time as integers +; elon - eccentric dipole longitude [degrees N] +; +; Return Value: +; MLT in floating point hour +; +;+----------------------------------------------------------------------------- +*/ +double ecdip_mlt(int yr, int mo, int dy, int hr, int mt, int sc, double elon) +{ + double lonmag_ref, tmag; + + lonmag_ref = ecdip_mlt_ref(yr,mo,dy, hr,mt,sc); + tmag = MOD(48 + (elon-lonmag_ref)/15., 24); + + return (tmag); +} + +/*----------------------------------------------------------------------------- +; +; NAME: +; inv_ecdip_mlt +; +; PURPOSE: +; Determine eccentric dipole longitude for given date/time and MLT (ecdip) +; +; CALLING SEQUENCE: +; elon = inv_ecdip_mlt(yr,mo,dy, hr,mt,sc, mlt); +; +; Input Arguments: +; yr,mo,dy - date as integers +; hr,mt,sc - time as integers +; mlt - eccentric dipole MLT +; +; Return Value: +; eccentric dipole longitude of MLT [degrees E] +; +;+----------------------------------------------------------------------------- +*/ +double inv_ecdip_mlt(int yr, int mo, int dy, int hr, int mt, int sc, double mlt) +{ + double lonmag_ref, elon; + + lonmag_ref = ecdip_mlt_ref(yr,mo,dy, hr,mt,sc); + elon = MOD(360 + lonmag_ref + 15*mlt, 360); + if (elon > 180) elon -= 360; + if (elon < -180) elon += 360; + + return (elon); +} + /*----------------------------------------------------------------------------- ; ; NAME: @@ -1193,7 +1502,6 @@ int mag2geo(const double xyzm[], double xyzg[]) { ; ;+----------------------------------------------------------------------------- */ - int geod2geoc(double lat, double lon, double alt, double rtp[]) { double a,b,f,a2,b2,st,ct,one,two,three,rho,cd,sd; @@ -1296,7 +1604,7 @@ int plh2xyz(double lat, double lon, double alt, double rtp[]) ; r - radial distance from center of Earth [RE] ; ; Output Argument: -; llh[3] - geodetic latitude and longitude using WGS84 [radians], +; llh[3] - geodetic latitude and longitude using WGS84 [degrees], ; distance above sea level [km] ; Return Value: ; err - error code @@ -1532,3 +1840,72 @@ int AACGM_v2_RK45(double xyz[], int idir, double *ds, double eps, int code) { return (0); } +/*----------------------------------------------------------------------------- +; +; NAME: +; ecdip_mlt_ref (translated from Pierre-Louis Blelly Matlab code) +; +; PURPOSE: +; Determine reference MLT location for given date/time. Used for +; eccentric dipole coordinates. +; +; CALLING SEQUENCE: +; mlt_ref = ecdip_mlt_ref(yr,mo,dy,hr,mt,sc); +; +; Input Arguments: +; yr,mo,dy - Date +; hr,mt,sc - Time +; +; Return Value: +; mlt - mlt reference of given date/time +; +;+----------------------------------------------------------------------------- +*/ +double ecdip_mlt_ref(int yr, int mo, int dy, int hr, int mt, int sc) +{ + int i,k; + double lonmag_ref, tilt; + double t,gst,M,L,R,obliq,slp; + double cgst,sgst,sob,cob,cslp,sslp; + double fday, julian; + double pos[3], coord[3]; + + fday = (hr + mt/60. + sc/3600.)/24.; + julian = TimeYMDHMSToJulian(yr,mo,dy,hr,mt,sc) - + TimeYMDHMSToJulian(1899,12,31,12,0,0); + + lonmag_ref = tilt = 0.; + + t = julian/36525.; + L = MOD(279.696678 + 0.9856473354*julian, 360); + gst = MOD(279.690983 + 0.9856473354*julian + 360.*fday + 180., 360); + M = MOD(358.475845 + 0.985600267*julian, 360); + L += (1.91946 - 0.004789*t)*sin(M*DTOR) + 0.020094*sin(2*M*DTOR); + obliq = 23.45229 - 0.0130125*t; + slp = L - (0.0055686 - 0.025e-4*t); + + cgst = cos(gst*DTOR); + sgst = sin(gst*DTOR); + sob = sin(obliq*DTOR); + cob = cos(obliq*DTOR); + sslp = sin(slp*DTOR); + cslp = cos(slp*DTOR); + + pos[0] = -( cslp*cgst + sslp*sgst*cob) * RE; + pos[1] = -(-cslp*sgst + sslp*cgst*cob) * RE; + pos[2] = -( sslp*sob ) * RE; + + for (k=0; k<3; k++) pos[k] -= ecdip.pos[k]; + + for (k=0; k<3; k++) { + coord[k] = 0.; + for (i=0; i<3; i++) coord[k] += ecdip.g2m[k][i]*pos[i]; + } + + lonmag_ref = MOD(360 + atan2(coord[1],coord[0])/DTOR, 360); + R = sqrt(coord[0]*coord[0] + coord[1]*coord[1] + coord[2]*coord[2]); + tilt = -asin(coord[2]/R)/DTOR; + + return (lonmag_ref); +} + diff --git a/c_aacgmv2/src/mlt_v2.c b/c_aacgmv2/src/mlt_v2.c index caa5ed60..82af6260 100755 --- a/c_aacgmv2/src/mlt_v2.c +++ b/c_aacgmv2/src/mlt_v2.c @@ -109,7 +109,7 @@ double MLTConvert_v2(int yr, int mo, int dy, int hr, int mt ,int sc, /* AACGM date/time not set so set it to the date/time passed in */ err = AACGM_v2_SetDateTime(yr,mo,dy,hr,mt,sc); if (err != 0) return (err); - } else { + } else if (!AACGM_v2_Locked()) { /* If date/time passed into function differs from AACGM data/time by more * than 30 days, recompute the AACGM-v2 coefficients */ ajd = TimeYMDHMSToJulian(ayr,amo,ady,ahr,amt,asc); diff --git a/c_aacgmv2/src/rtime.c b/c_aacgmv2/src/rtime.c old mode 100644 new mode 100755 index b4010bea..5b3dcc92 --- a/c_aacgmv2/src/rtime.c +++ b/c_aacgmv2/src/rtime.c @@ -6,8 +6,8 @@ /* (c) 2010 JHU/APL & Others - Please Consult - LICENSE.superdarn-rst.3.2-beta-4-g32f7302.txt for more information. - Also LICENSE + LICENSE.superdarn-rst.3.2-beta-4-g32f7302.txt for more information. + */ #include @@ -170,7 +170,7 @@ double TimeYMDHMSToEpoch(int yr,int mo,int dy,int hr,int mn,double sc) { if (tz) setenv("TZ", tz, 1); else unsetenv("TZ"); tzset(); - + return clock+(sc-floor(sc)); } @@ -205,8 +205,8 @@ double TimeYMDHMSToJulian(int yr,int mo,int dy,int hr,int mt,double sc) { jdoy=i+1720994.5+B; - dfrac=1+TimeYMDHMSToYrsec(yr+1,mo,dy,hr,mt,sc)/DAY_SEC; - + dfrac=1+(double)TimeYMDHMSToYrsec(yr+1,mo,dy,hr,mt,sc)/DAY_SEC; + return jdoy+dfrac; } @@ -266,3 +266,48 @@ int TimeJulianToYMDHMS(double jd,int *yr,int *mo, return 0; } + +/*----------------------------------------------------------------------------- +; +; NAME: +; dayno +; +; PURPOSE: +; Function to compute the day of the year and the number of days in the +; year. +; +; CALLING SEQUENCE: +; doy = dayno(year, month, day, diy); +; +; Input Arguments: +; year - year [1965-2014] +; month - month of year [01-12] +; day - day of month [01-31] +; +; Output Arguments (integer pointers): +; diy - number of days in the given year +; +; Return Value: +; error code +; +;+----------------------------------------------------------------------------- +*/ + +int dayno(int year, int month, int day, int *diy) +{ + int k,tot; + int ndays[] = {31,28,31,30,31,30,31,31,30,31,30,31}; + + *diy = 365; + if(((year%4==0)&&(year%100!=0))||(year%400==0)) { + ndays[1]++; + *diy = 366; + } + + tot = 0; + for (k=0; k1) printf("TEST: geographic to AACGM-v2; coefficients\n"); diff --git a/docs/conf.py b/docs/conf.py index 1b900671..4ae9ac52 100644 --- a/docs/conf.py +++ b/docs/conf.py @@ -1,4 +1,6 @@ +"""Configuration file for documetation.""" import os +from pyproject_parser import PyProject extensions = ['sphinx.ext.autodoc', 'sphinx.ext.autosummary', @@ -6,16 +8,20 @@ 'sphinx.ext.coverage', 'sphinx.ext.ifconfig', 'sphinx.ext.viewcode', - 'sphinxcontrib.napoleon', + 'sphinx.ext.napoleon', 'numpydoc'] +# General information about the project. +info = PyProject.load("../pyproject.toml") + +# Set the basic variables source_suffix = '.rst' master_doc = 'index' project = 'AACGM-v2 Python library' -year = '2023' +year = '2024' author = 'Angeline G. Burrell, et al.' copyright = '{0}, {1}'.format(year, author) -version = release = '2.6.3' +version = release = info.project['version'].base_version # `on_rtd` is whether we are on readthedocs.org on_rtd = os.environ.get('READTHEDOCS', None) == 'True' diff --git a/docs/contributing.rst b/docs/contributing.rst index e582053e..46281822 100644 --- a/docs/contributing.rst +++ b/docs/contributing.rst @@ -1 +1,3 @@ +.. _contributing: + .. include:: ../CONTRIBUTING.rst diff --git a/docs/index.rst b/docs/index.rst index 40f35b5e..8c51605d 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -3,13 +3,14 @@ Contents ======== .. toctree:: - :maxdepth: 2 + :maxdepth: 1 readme installation usage reference/index contributing + maintenance authors changelog diff --git a/docs/installation.rst b/docs/installation.rst index a5480cfe..9bbec837 100644 --- a/docs/installation.rst +++ b/docs/installation.rst @@ -1,13 +1,15 @@ +.. _installation: + ============ Installation ============ This package requires NumPy, which you can install alone or as a part of SciPy. -`Some Python distributions `_ come -with NumPy/SciPy pre-installed. For Python distributions without NumPy/SciPy, -the operating system package managers can be used to install :py:mod:`numpy`. -However, this step may be unnecessary, as PyPi should install :py:mod:`numpy` -along with :py:mod:`aacgmv2` if it is missing. +`Some Python distributions `_ come with NumPy/SciPy +pre-installed. For Python distributions without NumPy/SciPy, the operating +system package managers can be used to install :py:mod:`numpy`. However, this +step may be unnecessary, as PyPi should install :py:mod:`numpy` along with +:py:mod:`aacgmv2` if it is missing. We recommend installing this package at the command line using ``pip``:: @@ -19,7 +21,7 @@ Tested Setups The package has been tested with the following setups (others might work, too): * Mac (64 bit), Windows (64 bit), and Linux (64 bit) -* Python 3.7, 3.8, 3.9, and 3.10 +* Python 3.9, 3.10, 3.11, and 3.12 Known Problems and Solutions ============================ diff --git a/docs/maintenance.rst b/docs/maintenance.rst new file mode 100644 index 00000000..deb17125 --- /dev/null +++ b/docs/maintenance.rst @@ -0,0 +1,80 @@ +Package Maintenance +=================== + +Updating IGRF +------------- + +The `International Geomagnetic Reference Field `_ +is regularly updated to reflect the most recent changes to the Terrestrial +magnetic field. AACGMV2 currently uses IRGF-14 coefficients, which are provided +in the ``aacgmv2/aacgmv2/igrf14coeff.txt`` file and a combined magnetic model +that uses coefficients provided in ``aacgmv2/aacgmv2/magmodel_1590-2025.txt``. +To change or update the magnetic field coefficients used by AACGMV2, you need to +obtain the new IGRF coefficients, magnetic model coefficients, and the AACGMV2 +coefficients, and update the Python and C code. If substantial changes have been +made to the C code, it may be necessary to update the functions in +``aacgmv2/aacgmv2/aacgmv2module.c``, as this is what allows Python to interface +with the AACGMV2 source code. Updates to the AACGMV2 coefficients and code may +be obtained from the website hosted by +`Dartmouth `_. The C tarball +contains the IGRF and magnetic model coefficient files. + +Assuming no changes were made to the way coefficients are handled or the C code +is called, the updating process is simple: + +1. Clone the repository or update your fork of the repository + (see :ref:`contributing`). +2. Replace the AACGMV2 coefficients in ``aacgmv2/aacgmv2/aacgm_coeffs``. +3. Replace the IGRF coefficient file in ``aacgmv2/aacgmv2/``. +4. Update the ``aacgmv2/__init__.py`` global variables ``AACGM_v2_DAT_PREFIX`` + and ``IGRF_COEFFFS`` +5. If the C code has been updated, update the ``c_aacgmv2/README.txt``, + ``c_aacgmv2/release_notes.txt``, and ``LISCENCE-AstAlg.txt`` files for the + new version. +6. If the C code has been updated, update the header files in + ``c_aacgmv2/include``. Check to see if any files have been removed. If + ``c_aacgmv2/include/astalg.h`` ends up removing the ``M_PI`` definition, add + it back in (needed for Windows). +7. If the C code has been updated, update the source files in ``c_aacgmv2/src``. + Check to see if any files have been removed; remove them from the list of + ``aacgmv2/setup.py`` sources. If the ``NAN`` and ``isfinite`` + definitions are removed from ``mlt_v2.c`` and the ``EINVAL`` definition and + ``setenv`` function are removed from ``rtime.c``, add these and the header + info back in (needed for Windows). Also, fix the commenting style in + ``test_aacgm.c`` to reduce compiler warnings. +8. Rebuild and install AACGMV2 following the instructions in + :ref:`installation`. +9. Update the unit tests in the ``aacgmv2/aacgmv2/tests/`` directory so that + they check the functions are working correctly with dates after the IGRF + epoch update. You will have to update the hard-coded confirmation values + used by these tests, but the values should not change by more than a + hundredth of a degree. Tests that may need to be updated include: + + + A. ``test_c_aacgmv2.py::TestCAACGMV2.test_convert`` + B. ``test_cmd_aacgmv2.py::TestCmdAACGMV2::test_convert_stdin_stdout`` + C. ``test_cmd_aacgmv2.py::TestCmdAACGMV2::test_convert_mlt_stdin_stdout`` + D. ``test_struct_aacgmv2.py::TestTopVariables::test_top_parameters`` + E. ``test_utils_aacgmv2.py::TestUtilsAACGMV2::test_igrf_dipole_axis`` + F. ``environ/test_environ_aacgmv2.py::TestPyEnviron`` + + +10. Commit all changes and create a pull request on GitHub to integrate your + branch with updated IGRF into the main repository. + +Modifying the C Source +---------------------- +When modifying the C source code, it can be helpful to run a preliminary +validation of the C output independent of the Python wrapper. This should +be done within the ``aacgmv2/c_aacgmv2`` directory. + +1. Build the ``test_aacgm`` binary by following the instructions in + ``aacgmv2/c_aacgmv2/README.txt``. You will have to alter the compilation + command to preface each ``.c`` file with ``src`` and also add ``-Iinclude``. +3. Execute the ``test_aacgm`` binary. +4. Confirm the output printed to the screen matches the test output shown in + the comment block provided in the ``aacgmv2/c_aacgmv2/README.txt``. +5. If the modifications involved adding or removing C source files, modify + the list of extension sources in ``setup.py``. +6. Rebuild and install AACGMV2 following the instructions in + :ref:`installation`. diff --git a/docs/requirements.txt b/docs/requirements.txt deleted file mode 100644 index 51b6ed5d..00000000 --- a/docs/requirements.txt +++ /dev/null @@ -1,5 +0,0 @@ -sphinx -sphinxcontrib-napoleon -numpydoc -sphinx_rtd_theme --e . diff --git a/pyproject.toml b/pyproject.toml index afb7cec3..fbd73b4d 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -7,12 +7,13 @@ requires = [ [project] name = "aacgmv2" +version = "2.7.0" license = {file = "LICENSE"} description = "A Python wrapper for AACGM-v2 magnetic coordinates" maintainers = [ - {name = "Angeline G. Burrell", email = "angeline.burrell@nrl.navy.mil"}, + {name = "Angeline G. Burrell", email = "angeline.g.burrell.civ@us.navy.mil"}, ] -requires-python = ">=3.7" +requires-python = ">=3.9" dependencies = [ "numpy", ] @@ -38,30 +39,83 @@ classifiers = [ 'Operating System :: Microsoft :: Windows', "Programming Language :: Python", "Programming Language :: Python :: 3", - "Programming Language :: Python :: 3.7", - "Programming Language :: Python :: 3.8", "Programming Language :: Python :: 3.9", "Programming Language :: Python :: 3.10", + "Programming Language :: Python :: 3.11", + "Programming Language :: Python :: 3.12", "Programming Language :: Python :: Implementation :: CPython", "Topic :: Software Development :: Libraries", "Topic :: Scientific/Engineering :: Physics", "Topic :: Utilities", ] -dynamic = ['version'] -[tool.project.scripts] -aacgmv2 = {reference = 'aacgmv2.__main__:main', type = 'console'} +[project.scripts] +aacgmv2 = 'aacgmv2.__main__:main' [project.optional-dependencies] test = [ + "build", + "flake8", + "flake8-docstrings", "pytest", - "pytest-cov", - "pytest-xdist", - ] -doc = ["sphinx>=1.3", "sphinx-rtd-theme"] + "pytest-cov" +] +doc = [ + "sphinx>=1.3", + "sphinxcontrib-napoleon", + "numpydoc", + "pyproject_parser", + "sphinx-rtd-theme>=1.2.2" +] [project.urls] source = "https://github.com/aburrell/aacgmv2" documentation = "https://aacgmv2.readthedocs.io/en/latest/" tracker = "https://github.com/aburrell/aacgmv2/issues" download = "https://github.com/aburrell/aacgmv2/releases" + +[tool.coverage.paths] +source = [ + "aacgmv2", + "c_aacgmv2" +] + +[tool.coverage.run] +branch = true +relative_files = true +include = [ + "*/aacgmv2/*", + "*/aacgmv2/tests/*" +] +source = [ + "aacgmv2", + "c_aacgmv2" +] +parallel = true + +[tool.coverage.report] +show_missing = true +precision = 2 + +[tool.pytest] +norecursedirs = [ + ".git", + ".tox", + ".env", + "dist", + "build", + "south_migrations", + "migrations" +] +python_files = [ + "test_*.py", + "*_test.py", + "tests.py" +] + +[tool.isort] +line_length = 80 +known_first_party = "aacgmv2" +forced_separate = "test_aacgmv2" +length_sort = 1 +multi_line_output = 0 diff --git a/setup.cfg b/setup.cfg index daad4ad8..10fbb512 100644 --- a/setup.cfg +++ b/setup.cfg @@ -1,96 +1,8 @@ [metadata] name = aacgmv2 -version = 2.6.3 -long_description = file: README.rst, CHANGELOG.rst -long_description_content_type = text/x-rst -keywords = aacgm - aacgm-v2 - aacgmv2 - magnetic coordinates - altitude adjusted corrected geomagnetic coordinates - mlt - magnetic local time - conversion - converting -classifiers = - Development Status :: 5 - Production/Stable - Intended Audience :: Science/Research - License :: OSI Approved :: MIT License - Operating System :: Unix - Operating System :: POSIX - Operating System :: MacOS :: MacOS X - Operating System :: Microsoft :: Windows - Programming Language :: Python - Programming Language :: Python :: 3 - Programming Language :: Python :: 3.7 - Programming Language :: Python :: 3.8 - Programming Language :: Python :: 3.9 - Programming Language :: Python :: 3.10 - Programming Language :: Python :: Implementation :: CPython - Topic :: Software Development :: Libraries - Topic :: Scientific/Engineering :: Physics - Topic :: Utilities - -[options] -zip_safe = False -install_requires = numpy -include_package_data = True -include_entry_points = True - -[aliases] -release = register clean --all sdist +version = 2.7.0 [flake8] max-line-length = 80 exclude = build/*,tests/*,*/migrations/*,*/south_migrations/*,setup.py ignore = W503 - -[coverage:paths] -source = - aacgmv2 - c_aacgmv2 - -[coverage:run] -branch = True -relative_files = True -include = */aacgmv2/* - */aacgmv2/tests/* -source = aacgmv2 - c_aacgmv2 -parallel = True - -[coverage:report] -show_missing = true -precision = 2 -omit = *migrations* - -[tool:pytest] -norecursedirs = - .git - .tox - .env - dist - build - south_migrations - migrations -python_files = - test_*.py - *_test.py - tests.py -addopts = - -rxEfsw - --strict-markers - --ignore=docs/conf.py - --ignore=setup.py - --ignore=.eggs - --doctest-modules - --doctest-glob=\*.rst - --tb=short - -[isort] -line_length=80 -known_first_party=aacgmv2 -default_section=THIRDPARTY -forced_separate=test_aacgmv2 -length_sort=1 -multi_line_output=0 diff --git a/setup.py b/setup.py index 7946024d..d48de1da 100644 --- a/setup.py +++ b/setup.py @@ -21,7 +21,6 @@ sources=['aacgmv2/aacgmv2module.c', 'c_aacgmv2/src/aacgmlib_v2.c', 'c_aacgmv2/src/astalglib.c', - 'c_aacgmv2/src/genmag.c', 'c_aacgmv2/src/igrflib.c', 'c_aacgmv2/src/mlt_v2.c', 'c_aacgmv2/src/rtime.c'],