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Hi, I am using RcisTarget for the GRN construction using SCENIC.
I wanted to investigate the Rcistarget database in order to know which genes are transcription factors and which genes are target genes of specific transcription factors.
With the downloaded 'feather' file, I cannot get the information I want to see.
If there's an additional file or anyway to get the TF and its target, how can I retrieve them?
The desired format would be like below
Thanks in advance.
Best,
Harim
The text was updated successfully, but these errors were encountered:
harimchun
changed the title
TF and their target in gene level
TF and their target at gene level
Feb 14, 2023
Hi, I am using RcisTarget for the GRN construction using SCENIC.
I wanted to investigate the Rcistarget database in order to know which genes are transcription factors and which genes are target genes of specific transcription factors.
With the downloaded 'feather' file, I cannot get the information I want to see.
If there's an additional file or anyway to get the TF and its target, how can I retrieve them?
The desired format would be like below
Thanks in advance.
Best,
Harim
The text was updated successfully, but these errors were encountered: