diff --git a/environment.yml b/environment.yml index 4fc136a5..6c748ff9 100644 --- a/environment.yml +++ b/environment.yml @@ -1,4 +1,4 @@ -name: happypose_torch2 +#name: happypose_torch2 channels: - conda-forge - pytorch diff --git a/happypose/pose_estimators/megapose/docker/Dockerfile.megapose b/happypose/pose_estimators/megapose/docker/Dockerfile.megapose index f5d5d38e..ef2a89ec 100644 --- a/happypose/pose_estimators/megapose/docker/Dockerfile.megapose +++ b/happypose/pose_estimators/megapose/docker/Dockerfile.megapose @@ -56,7 +56,7 @@ RUN source $CONDA_DIR/bin/activate && \ pip install selenium omegaconf simplejson line_profiler opencv-python \ torchnet tqdm lxml transforms3d panda3d joblib xarray pandas xarray matplotlib \ bokeh plyfile trimesh wget ipdb panda3d-gltf colorama pyyaml ipykernel \ - scipy pypng h5py seaborn kornia meshcat pyarrow dt_apriltags open3d structlog \ + scipy pypng h5py seaborn kornia meshcat pyarrow dt_apriltags structlog \ imageio # Blender @@ -132,7 +132,6 @@ RUN apt-get install -y tmux # Install TEASER++ RUN apt install -y cmake libeigen3-dev libboost-all-dev \ && source $CONDA_DIR/bin/activate \ - && pip install open3d \ && mkdir /build && cd /build && git clone https://github.com/MIT-SPARK/TEASER-plusplus.git \ && cd TEASER-plusplus && mkdir build && cd build \ && cmake -DTEASERPP_PYTHON_VERSION=3.9 .. && make teaserpp_python \ diff --git a/happypose/pose_estimators/megapose/inference/refiner_utils.py b/happypose/pose_estimators/megapose/inference/refiner_utils.py index 60527d4c..f71b8225 100644 --- a/happypose/pose_estimators/megapose/inference/refiner_utils.py +++ b/happypose/pose_estimators/megapose/inference/refiner_utils.py @@ -15,13 +15,6 @@ # Third Party import numpy as np -import open3d as o3d - - -def numpy_to_open3d(xyz): - pcd = o3d.geometry.PointCloud() - pcd.points = o3d.utility.Vector3dVector(xyz) - return pcd def compute_masks(mask_type, depth_rendered, depth_measured, depth_delta_thresh=0.1): diff --git a/happypose/pose_estimators/megapose/inference/teaserpp_refiner.py b/happypose/pose_estimators/megapose/inference/teaserpp_refiner.py index 2c8a00a9..42eb437a 100644 --- a/happypose/pose_estimators/megapose/inference/teaserpp_refiner.py +++ b/happypose/pose_estimators/megapose/inference/teaserpp_refiner.py @@ -27,10 +27,10 @@ from happypose.pose_estimators.megapose.inference.depth_refiner import DepthRefiner from happypose.pose_estimators.megapose.inference.refiner_utils import ( compute_masks, - numpy_to_open3d, ) from happypose.pose_estimators.megapose.inference.types import PoseEstimatesType from happypose.toolbox.lib3d.rigid_mesh_database import BatchedMeshes +from happypose.toolbox.lib3d.transform_ops import transform_pts_np from happypose.toolbox.renderer.panda3d_batch_renderer import Panda3dBatchRenderer from happypose.toolbox.renderer.types import Panda3dLightData from happypose.toolbox.visualization.meshcat_utils import get_pointcloud @@ -137,16 +137,11 @@ def compute_teaserpp_refinement( solution = solver.getSolution() - T = np.eye(4) - T[:3, :3] = solution.rotation - T[:3, 3] = solution.translation - T_tgt_src = T - - # check number of inliers - pc_src_o3d = numpy_to_open3d(pc_src) - pc_src_o3d_refined = pc_src_o3d.transform(T_tgt_src) - pc_src_refined = np.array(pc_src_o3d_refined.points) + T_tgt_src = np.eye(4) + T_tgt_src[:3, :3] = solution.rotation + T_tgt_src[:3, 3] = solution.translation + pc_src_refined = transform_pts_np(T_tgt_src, pc_src) diff = np.linalg.norm(pc_src_refined - pc_tgt, axis=-1) inliers = np.count_nonzero(diff < solver_params.noise_bound) @@ -158,8 +153,8 @@ def compute_teaserpp_refinement( "pc_tgt": pc_tgt, "pc_src_mask": pc_src_mask, "pc_tgt_mask": pc_tgt_mask, - "T": T, - "T_tgt_src": T, # transform that aligns src to tgt + "T": T_tgt_src, + "T_tgt_src": T_tgt_src, # transform that aligns src to tgt "num_inliers": inliers, } diff --git a/happypose/toolbox/lib3d/transform_ops.py b/happypose/toolbox/lib3d/transform_ops.py index e6bcba0d..361862fe 100644 --- a/happypose/toolbox/lib3d/transform_ops.py +++ b/happypose/toolbox/lib3d/transform_ops.py @@ -18,6 +18,7 @@ # Third Party import numpy as np +import numpy.typing as npt import torch import transforms3d @@ -25,6 +26,20 @@ from happypose.toolbox.lib3d.rotations import compute_rotation_matrix_from_ortho6d +def transform_pts_np(T: npt.NDArray, pts: npt.NDArray): + """Args: + ---- + T (torch.Tensor): (4, 4), homogeneous matrix representing a SE(3) transformation + pts (torch.Tensor): (n_pts, 3), 3D points to be transformed by T + + Returns + ------- + npt.NDArray: (n_pts, 3) + """ + + return (T[:3, :3] @ pts.T + T[:3, 3].reshape((3, 1))).T + + def transform_pts(T: torch.Tensor, pts: torch.Tensor) -> torch.Tensor: """Args: ---- diff --git a/poetry.lock b/poetry.lock index 82c33dbc..27f0146a 100644 --- a/poetry.lock +++ b/poetry.lock @@ -137,17 +137,6 @@ charset-normalizer = ["charset-normalizer"] html5lib = ["html5lib"] lxml = ["lxml"] -[[package]] -name = "blinker" -version = "1.8.2" -description = "Fast, simple object-to-object and broadcast signaling" -optional = false -python-versions = ">=3.8" -files = [ - 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