Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

What is the difference between 0.hic, 0.assembly and rawchrom.hic, rawchrom.assembly? #168

Open
XXH123a opened this issue Apr 10, 2023 · 0 comments
Open

What is the difference between 0.hic, 0.assembly and rawchrom.hic, rawchrom.assembly? #168

XXH123a opened this issue Apr 10, 2023 · 0 comments

Comments

@XXH123a
Copy link

XXH123a commented Apr 10, 2023

Dear developers.
Sorry to bother you again, but what is the difference between the two pairs of files I get when I run run-asm-pipeline.sh -r 0? Which pair of files j should I juicerbox? Also should I remove the area inside this chromosome indicated by the blue circle?

750cb4e24ffff3803f0fb3743481237
I look forward to your guidance and thank you most sincerely!
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@XXH123a