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some question about parameters #185

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oddguyeee opened this issue Jun 6, 2024 · 0 comments
Open

some question about parameters #185

oddguyeee opened this issue Jun 6, 2024 · 0 comments

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@oddguyeee
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Hi!

I recently encountered an issue with overcorrection during genome assembly. After reading manual_18022.pdf, I found that the problem might be in the edit module. Therefore, I am planning to optimize the corresponding parameters. However, after studying the relevant literature (Dudchenko et al. 2017), I still have some confusion about some of the parameters in this module.

Could you please explain the meanings of these parameters? For example "--editor-repeat-coverage", Or could you recommend some resources for me to study on my own?

Thank you.

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