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Gapping problems #78

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williamdlees opened this issue Jan 9, 2020 · 2 comments
Open

Gapping problems #78

williamdlees opened this issue Jan 9, 2020 · 2 comments
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@williamdlees
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The gapping algorithm used by ogrdbstats and OGRDB gives a wrong result if the reference sequence is partial at the 5' end.
@williamdlees williamdlees added the bug Something isn't working label Jan 9, 2020
@williamdlees
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Need to consider gapping of non-novel sequences in the repertoire, as well as novel alleles.

@williamdlees
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Fixed in OGRDB. Still need to fix ogrdbstats.

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@williamdlees