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destranding in chunks can result in duplicate rows #251

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alexg9010 opened this issue Feb 21, 2022 · 0 comments
Open

destranding in chunks can result in duplicate rows #251

alexg9010 opened this issue Feb 21, 2022 · 0 comments

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@alexg9010
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This has something to do with the destranding part of the unite function.
For destranding we are processing the methylRawDB in chunks and I assume that somehow the strand-paired cytosines could be included in non-overlapping chunks.

To mitigate this we should run destranding by chromosomes.

Originally posted by @alexg9010 in #129 (comment)
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