nf-core/nanostring: Changelog The format is based on Keep a Changelog
and this project adheres to Semantic Versioning .
v1.3.0 - 2024-08-27 - Micrometre
#66 - Updated to nf-core template 2.12.1#71 - Updated to nf-core template 2.13.1#73 - Updated to nf-core template 2.14.1
#65 - Issue with CREATE_GENE_HEATMAP if no list of genes was provided
#71 - Made column RCC_FILE_NAME mandatory#78 - Added Nanostring Tubemap original designfile to repository for future changes, fixed typo and removed version in picture
Dependency
Old version
New version
multiqc1.19
1.24.1
v1.2.1 - 2024-01-18 - Nanometre
#55 - Added the Bioinformatics publication to the citation list#55 - Updated to nf-core template 2.11.1#58 - Granularized the containers for NACHO and Heatmaps
Dependency
Old version
New version
nacho2.0.5
2.0.6
v1.2.0 - 2023-08-24 - Nanometre
#48 - Allow users to specify id column for heatmap #39 #46 - Update to nf-core template 2.9#42 - Allow users to specify normalization method: GEO (default) or GLM
#51 - Prevent HK-normalization while loading counts#51 - Use provided normalization method for Non-HK-normalized counts#46 - Publish NACHO QC reports #44 #47 - Update NACHO R package including bug fix #45 #47 - Set correct conda environment for COMPUTE_GENE_SCORES process
Dependency
Old version
New version
nacho2.0.4
2.0.5
#37 - Allow skipping heatmap creation #38
#37 - Use unique rownames for Heatmap creation
v1.1.0 - 2023-06-22 - Picometre
#33 - Add functionality to generate gene-count heatmaps #17 #32 - Add functinoality to compute gene scores #16
v1.0.0 - 2023-06-12 - Femtometre Initial release of nf-core/nanostring, created with the nf-core template.
#21 - Add quality control using NACHO #11 #21 - Add normalization with and without Housekeeping genes using NACHO #12 #21 - Add tests and respective test data #19 #23 - Add tables with non-housekeeping-normalized counts to MultiQC report
Dependency
Old version
New version
nacho-
2.0.4